PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026429950.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 363aa MW: 41826.2 Da PI: 9.9658

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026429950.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd+ll +++ ++G g W+ ++ ++g++R++k+c++rw++yl XP_026429950.1 14 KGAWAEEEDLLLRKCIIKYGEGKWRQVPLRVGLNRCRKSCRLRWLNYL 61 799*******************************************97 PP
2	Myb_DNA-binding	40.3	7.3e-13	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++ +k+lG++ W++Ia ++ gRt++++k++++++l XP_026429950.1 67 RGEFQPDEVDLIIRMHKLLGNR-WSLIAGRLL-GRTANDIKNYYNTHL 112 79999***************.****9.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MESSIVSSVK GLRKGAWAEE EDLLLRKCII KYGEGKWRQV PLRVGLNRCR KSCRLRWLNY 60 LQPNIKRGEF QPDEVDLIIR MHKLLGNRWS LIAGRLLGRT ANDIKNYYNT HLKKTCLSKS 120 KYNIEKGKQV VTTNKSGHDS NSRRDDGQDH GNQQVLKRRR SCSNINTTDH IVDKNMVTRV 180 LKPQVRTFKK ALWNANKLPT PTGMNNNHTT TTTTRFPSYS QVINKHITKC LPLLVDDQVS 240 NGQQIHDNST HWVKNILFSE TEEEDPMPNK KKLKKKKKRV TCNNNASKFE SNTTKGVEEG 300 MTTKDKNDGS NDDQHAHNCS PDDGKGWLEE GGSAGETNNF WDRYLDENLW PMLGEEQEQY 360 LQM

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MESSIVSSVK GLRKGAWAEE EDLLLRKCII KYGEGKWRQV PLRVGLNRCR KSCRLRWLNY  60
LQPNIKRGEF QPDEVDLIIR MHKLLGNRWS LIAGRLLGRT ANDIKNYYNT HLKKTCLSKS  120
KYNIEKGKQV VTTNKSGHDS NSRRDDGQDH GNQQVLKRRR SCSNINTTDH IVDKNMVTRV  180
LKPQVRTFKK ALWNANKLPT PTGMNNNHTT TTTTRFPSYS QVINKHITKC LPLLVDDQVS  240
NGQQIHDNST HWVKNILFSE TEEEDPMPNK KKLKKKKKRV TCNNNASKFE SNTTKGVEEG  300
MTTKDKNDGS NDDQHAHNCS PDDGKGWLEE GGSAGETNNF WDRYLDENLW PMLGEEQEQY  360
LQM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	271	279	KKLKKKKKR
2	276	306	KKKRVTCNNNASKFESNTTKGVEEGMTTKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-57	MYB family protein