PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026429932.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 346aa MW: 39679.7 Da PI: 9.8903

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026429932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.1	2.3e-14	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W + Ed+ll ++++++G g W ++ + g++R++k+c++rw++yl XP_026429932.1 16 KGPWAENEDQLLRKCIEKHGAGKWGQVPLRAGLNRCRKSCRLRWLNYL 63 79********************************************97 PP
2	Myb_DNA-binding	41.6	3e-13	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+ + +++lG++ W++Ia +++ gRt++++k++++++l XP_026429932.1 69 RGEFEADEADLITRMHNLLGNR-WSLIAGRVP-GRTANDIKNYYNTHL 114 79999***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MENASPSPPS SKGLRKGPWA ENEDQLLRKC IEKHGAGKWG QVPLRAGLNR CRKSCRLRWL 60 NYLQPNLKRG EFEADEADLI TRMHNLLGNR WSLIAGRVPG RTANDIKNYY NTHLKKKCSS 120 KHSQKNQQNK RRRPPHQNND TMVPKVLRPQ PRTFSKTPQW IINKESTPIP GMMNDNNNLK 180 TTTTRLPSPD STNHEDHELT NNSLLPAVNH LDLFSSKNVS SSDDYYCNFD NDQRLKEVGD 240 YLNNEVGDYL NNDDLYLDDD LWIMLGENQD GQVSLSQGKT KGKYSRNNPT QKLKLLTKGK 300 FNKIFAFNHV KYSYGAEKEK KKVRDLLDDA IVLDYVVPNS LSSVNI

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MENASPSPPS SKGLRKGPWA ENEDQLLRKC IEKHGAGKWG QVPLRAGLNR CRKSCRLRWL  60
NYLQPNLKRG EFEADEADLI TRMHNLLGNR WSLIAGRVPG RTANDIKNYY NTHLKKKCSS  120
KHSQKNQQNK RRRPPHQNND TMVPKVLRPQ PRTFSKTPQW IINKESTPIP GMMNDNNNLK  180
TTTTRLPSPD STNHEDHELT NNSLLPAVNH LDLFSSKNVS SSDDYYCNFD NDQRLKEVGD  240
YLNNEVGDYL NNDDLYLDDD LWIMLGENQD GQVSLSQGKT KGKYSRNNPT QKLKLLTKGK  300
FNKIFAFNHV KYSYGAEKEK KKVRDLLDDA IVLDYVVPNS LSSVNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	133	KKKCSSKHSQKNQQNKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-59	MYB family protein