PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026429838.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 336aa MW: 38830 Da PI: 10.6408

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026429838.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.2	6.2e-18	105	195	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k + +s+v + +l +p +f++++ k +++++ led++gr++e ++ ++s++ l++GW F+ +++L +gD +vF+l+++++f +v+ XP_026429838.1 105 FVKSMRRSHVYQGFWLNVPSEFCNKYLDK--KTFDIWLEDKEGREYETNF--IGTSNG--LSGGWGTFAVDHKLHDGDALVFQLIDKTRF--KVH 191 89**********************666..5679***********..888877..9*********************997777..999 PP EE-S CS B3 96 vfrk 99 +fr XP_026429838.1 192 IFRG 195 9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MATADNTINH SYEKEREKHL EENERRFKAW GVAKKARSRS LIVKKDSAVV FVKDRPQHKN 60 SKSSRSSRRP GQLYQKVATK EERADRLKQA MTLQARLESE GHQCFVKSMR RSHVYQGFWL 120 NVPSEFCNKY LDKKTFDIWL EDKEGREYET NFIGTSNGLS GGWGTFAVDH KLHDGDALVF 180 QLIDKTRFKV HIFRGSNDGG EGNAEILKKD REVTSDKEDV ELGNSSKYKD WGSDVVAENR 240 KEEKATNPAR KTKGSTSRRL QPSRSSKQLA QPRIQAEVSK KCQREAAERK KPVQKRKMKE 300 KLLTKKRFDI SQVTYFRQIV KNLYKGSKKV PLVTNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	8e-31	B3 family protein