PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026429011.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 492aa MW: 54941.9 Da PI: 6.9826

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026429011.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.7e-18	140	185	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g WT eEd llvd+vkq+G + W+ Ia+++ gR +kqc++rw+++ XP_026429011.1 140 KGQWTDEEDRLLVDLVKQYGERKWAQIAQKLL-GRAGKQCRERWHNH 185 799**************************9.**********97 PP
2	Myb_DNA-binding	53.3	6.3e-17	192	234	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eE+ lv+a+++ G++ W+ Ia+ ++ gRt++ +k++w+ XP_026429011.1 192 KDTWSEEEEMMLVKAHEKIGNR-WAEIAKQIP-GRTENAIKNHWN 234 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MEGNGGGLVY MNSHLLRPTT PPLEAIDRFL WSSTNEKQAR RNTDNKGFCV QYSYSTSLGG 60 ITRTPTCLEH GNGGGFMLPR SAIPDIGLVG GFFANHNGSS QIFTNNNVGS REVDYFGEKK 120 KCFGVEKRAK NGGVSTTLIK GQWTDEEDRL LVDLVKQYGE RKWAQIAQKL LGRAGKQCRE 180 RWHNHSRPDI KKDTWSEEEE MMLVKAHEKI GNRWAEIAKQ IPGRTENAIK NHWNATKRRL 240 NSGRKNKKVV GQGRKSQPSI LQDYIITKII TSNVSSITNS TTTSPNGSHT TNPSDHVYPE 300 PSESSFTDDS STAFLDHTYN DELQFFQKFF GNLDNEPYSS DAATTVRSYT HEKSFQAGQS 360 PENHIGLELA GDNTTLSMKI EKCDYSALNN NTTTETLQLS SDMKGYQQGT TCTGSIPSST 420 SPSTLYTDSY LSYLLNGGLS AGISSSLNED YIDYYQHQPN VCIQQNDQAA SWYTGKKEMD 480 LIEMLSYSQC MQ

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MEGNGGGLVY MNSHLLRPTT PPLEAIDRFL WSSTNEKQAR RNTDNKGFCV QYSYSTSLGG  60
ITRTPTCLEH GNGGGFMLPR SAIPDIGLVG GFFANHNGSS QIFTNNNVGS REVDYFGEKK  120
KCFGVEKRAK NGGVSTTLIK GQWTDEEDRL LVDLVKQYGE RKWAQIAQKL LGRAGKQCRE  180
RWHNHSRPDI KKDTWSEEEE MMLVKAHEKI GNRWAEIAKQ IPGRTENAIK NHWNATKRRL  240
NSGRKNKKVV GQGRKSQPSI LQDYIITKII TSNVSSITNS TTTSPNGSHT TNPSDHVYPE  300
PSESSFTDDS STAFLDHTYN DELQFFQKFF GNLDNEPYSS DAATTVRSYT HEKSFQAGQS  360
PENHIGLELA GDNTTLSMKI EKCDYSALNN NTTTETLQLS SDMKGYQQGT TCTGSIPSST  420
SPSTLYTDSY LSYLLNGGLS AGISSSLNED YIDYYQHQPN VCIQQNDQAA SWYTGKKEMD  480
LIEMLSYSQC MQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	4e-65	MYB family protein