PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428753.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 374aa MW: 42994.7 Da PI: 10.1262

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.5e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ + R +k+c +rw +yl XP_026428753.1 4 RQRWRAEEDSLLRAYVKQYGPREWNLVSQRMNtpLDRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.3	1.3e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_026428753.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MKERQRWRAE EDSLLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENSKSTDP 120 IDEGKYDRIL ETFAEKLVRE RSTPTPSPTP SFFMATSNAG FLQSDAATAA PPPPQPTLLP 180 PWLSNSNGPL TTSSSPSVTL SLSPSTSAPS PTIPWLQPER TGTDNSNNNN NSSLMLSNLA 240 PHGSVSTNRE RLIVTELSDC CRELEEGHRA WAAHKKEATW RLKRVELQLE SEKACRKREK 300 MEEIEMKVRA LREEQKVSLE RVEAEYREQL AGLRRDADAK EQKLADQWAA KHIRLMKFVE 360 QIGRQRPSIE SNCR

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MKERQRWRAE EDSLLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENSKSTDP  120
IDEGKYDRIL ETFAEKLVRE RSTPTPSPTP SFFMATSNAG FLQSDAATAA PPPPQPTLLP  180
PWLSNSNGPL TTSSSPSVTL SLSPSTSAPS PTIPWLQPER TGTDNSNNNN NSSLMLSNLA  240
PHGSVSTNRE RLIVTELSDC CRELEEGHRA WAAHKKEATW RLKRVELQLE SEKACRKREK  300
MEEIEMKVRA LREEQKVSLE RVEAEYREQL AGLRRDADAK EQKLADQWAA KHIRLMKFVE  360
QIGRQRPSIE SNCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-135	MYB family protein