PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428380.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 283aa    MW: 32454.8 Da    PI: 7.6506
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428380.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.54.4e-08511172291
            FAR1  22 skrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     ++  gei ++tf+C + gk +++ +k      ++++t+++  a++++++++   ++++k++l  nH+l+p
  XP_026428380.1  51 KNILGEIRSYTFTCARAGKCDNTGEK---PLDPQVTTKCQFPARIMIRLDTLVGYVISKVDLVYNHPLNP 117
                     456789*************9998877...89999*********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MENLCRQKER VYVIQFKNRS NQENFDDKSD FIATKGDGGG PKDPPTCSVK KNILGEIRSY  60
TFTCARAGKC DNTGEKPLDP QVTTKCQFPA RIMIRLDTLV GYVISKVDLV YNHPLNPDDS  120
RFFRCNRYIS AHVMNQIDLF DRAGVRVNKV YNICRNEHGG PENMTCTPKD CINMVDKLRR  180
IRLEEGDAAA ILKYFANMSM QNSGFYYKVD LDNDGYLDKV FWADGRYREA YKEFGEVISF  240
DTTYLVNKYN MPFAPFVGVN HHGQSILFGC GLVSHEDKDS FAW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-37FAR1 family protein