PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428245.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 335aa MW: 38230.9 Da PI: 10.5601

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.1	8.2e-13	73	115	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +eEd ll +++ ++G g W++++ + g++R++k+c++rw++yl XP_026428245.1 73 KEEDILLRKCIMEYGEGKWRLVPLRAGLNRCRKSCRLRWLNYL 115 7****************************************97 PP
2	Myb_DNA-binding	42	2.1e-13	121	166	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++ +k+lG++ W++Ia +++ gRt+ ++k++++++l XP_026428245.1 121 RGEFKPDEVDLIIRMHKLLGNR-WSLIAGRLP-GRTASDIKNYYNTHL 166 8999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MEWNLLEPHK LTHKLSSHAS GNMSNKSKKN SIVGLGTNFF VDVFAKQVSQ VLRTVKEGCI 60 VFHLQSKYGG FFKEEDILLR KCIMEYGEGK WRLVPLRAGL NRCRKSCRLR WLNYLQPNII 120 RGEFKPDEVD LIIRMHKLLG NRWSLIAGRL PGRTASDIKN YYNTHLKRTC FSKYNSEVAM 180 SKKSGHRYGQ DHDRCQNLKR KRHSPKVNTI DLTSSKHIIT QVLRPQPRTL IMTSQWNMNT 240 VRTPTGMNNN NIDTPAGLPN NSQVVNKNIN KCVPLAVDDY LEKFTAEADK EDSLSKKKQV 300 TYNNNASLIT KGNTTKGVKE GMTKGKNDGS KDQHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	7e-52	MYB family protein