PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427610.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 407aa MW: 45632.4 Da PI: 10.0149

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	36.4	9.4e-12	148	224	20	98
HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 20 kkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 k+ +++h + + +++lede+g ++e +i + + +++GW+ F+ +++L++gD vvF+ +++ ++++v +f+ XP_026427610.1 148 KSMLRSHvyscfwlnQ----LKLDMVLEDEEGLEYEAVYI--PER--TGISGGWRAFALDHKLDDGDAVVFE--RTEAARFKVYIFK 224 4555555555564322....4468*************4..433..4499*******************..4477777999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MAKGTCDNNS YEEARKQRLE ENKKRFEDLG IAKITKTLSE FTKMGKESPG KKQVKPRSRT 60 APTSPDSLRR SSRPRSTAIS YQEEYTDHSL LTKRSRSRVR SSSASSSSYI ARPLEEIKVA 120 TRKERCAALK CAESFESNLQ SKHPSFVKSM LRSHVYSCFW LNQLKLDMVL EDEEGLEYEA 180 VYIPERTGIS GGWRAFALDH KLDDGDAVVF ERTEAARFKV YIFKGSNGGG KVNAKEMKRA 240 TESKTLKLQK VKKSDENDED ADDNMSKEKD ALEAKARGKK ARKSEKVIKS DTDNCASEEE 300 LMELTGDGGR KARSSKKLRK SGTNADMGEE DLVQISKQQR TTRNSKKAED CDISGVRKIE 360 NSVKAAEPAK EINGSVSRRL QLGRHSKRVA KTGAEEGKTT ELVDVAY

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MAKGTCDNNS YEEARKQRLE ENKKRFEDLG IAKITKTLSE FTKMGKESPG KKQVKPRSRT  60
APTSPDSLRR SSRPRSTAIS YQEEYTDHSL LTKRSRSRVR SSSASSSSYI ARPLEEIKVA  120
TRKERCAALK CAESFESNLQ SKHPSFVKSM LRSHVYSCFW LNQLKLDMVL EDEEGLEYEA  180
VYIPERTGIS GGWRAFALDH KLDDGDAVVF ERTEAARFKV YIFKGSNGGG KVNAKEMKRA  240
TESKTLKLQK VKKSDENDED ADDNMSKEKD ALEAKARGKK ARKSEKVIKS DTDNCASEEE  300
LMELTGDGGR KARSSKKLRK SGTNADMGEE DLVQISKQQR TTRNSKKAED CDISGVRKIE  360
NSVKAAEPAK EINGSVSRRL QLGRHSKRVA KTGAEEGKTT ELVDVAY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	98	KRSRSR
2	279	320	KKARKSEKVIKSDTDNCASEEELMELTGDGGRKARSSKKLRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	1e-45	B3 family protein