PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427541.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 403aa MW: 44904.9 Da PI: 4.947

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.9	7.5e-18	100	189	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ + l +p kf++++++k e++ +tl de+g++ k+ ++++ l++GW++Fv +++L egD vvF+l++ ++f +v XP_026427541.1 100 FVKLMVKSHVSGEFSLGIPSKFCAKFMLK--EDISMTLLDEEGKEHIAKY--LAGKCG--LSAGWRGFVIDHKLVEGDPVVFQLIEINKF--KVY 186 89**********************999..5667***********..666666..9*********************987888..787 PP EE- CS B3 96 vfr 98 ++r XP_026427541.1 187 IVR 189 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDTQESAAAE DDVLRIKNSM ETEEEDDDGM ALTHFSHPSA IASSNPKSQI TTVTVADSVK 60 ESTESENRSL KVENGKAKLL DPIERAEEFR SSLDPKFPSF VKLMVKSHVS GEFSLGIPSK 120 FCAKFMLKED ISMTLLDEEG KEHIAKYLAG KCGLSAGWRG FVIDHKLVEG DPVVFQLIEI 180 NKFKVYIVRT IGLGEVDSAF GHLQLEACAQ KSSLGKAGDD TKPTRNTVVG KPKRLPLPVA 240 DQPKNCSEEA DSENVEGIRF ASSVPEFEDI KNVESFNIIY NDLIIDSEMS KHVRSRYYKL 300 CCSQNSFLHK NLVPGLNCKL VAGMICETVN ISDAIQSSQV RSTSRDVLQL WRKSLEAFEH 360 LDMNVGFLLP RLDELVRLAS ESEQAVDLKR DREAINERKL AEE

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDTQESAAAE DDVLRIKNSM ETEEEDDDGM ALTHFSHPSA IASSNPKSQI TTVTVADSVK  60
ESTESENRSL KVENGKAKLL DPIERAEEFR SSLDPKFPSF VKLMVKSHVS GEFSLGIPSK  120
FCAKFMLKED ISMTLLDEEG KEHIAKYLAG KCGLSAGWRG FVIDHKLVEG DPVVFQLIEI  180
NKFKVYIVRT IGLGEVDSAF GHLQLEACAQ KSSLGKAGDD TKPTRNTVVG KPKRLPLPVA  240
DQPKNCSEEA DSENVEGIRF ASSVPEFEDI KNVESFNIIY NDLIIDSEMS KHVRSRYYKL  300
CCSQNSFLHK NLVPGLNCKL VAGMICETVN ISDAIQSSQV RSTSRDVLQL WRKSLEAFEH  360
LDMNVGFLLP RLDELVRLAS ESEQAVDLKR DREAINERKL AEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	4e-38	B3 family protein