PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427531.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 414aa MW: 46687.8 Da PI: 7.147

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.1e-15	134	179	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ XP_026427531.1 134 RGHWRPAEDFKLKELVCQYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 179 899***************************.*********996 PP
2	Myb_DNA-binding	54.9	2e-17	186	229	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ XP_026427531.1 186 RRAFSEEEEERLLTAHNLYGNK-WAMIARLFP-GRTDNAVKNHWHV 229 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGLQQLHSSV NIMPKKNDSS GGSYKGFSGV NNFLPPPPLS PCFGVLDSPK KRLCVKSEMG 60 FQNLSHPLEK QERRWNFQIS EGTRMDEGFS GGEDEKNVMM MKRSTGEMED DEMFIAEHYN 120 ESGSQSVNNK LCSRGHWRPA EDFKLKELVC QYGPQNWNLI AEKLEGRSGK SCRLRWFNQL 180 DPRINRRAFS EEEEERLLTA HNLYGNKWAM IARLFPGRTD NAVKNHWHVI MARKHREQSS 240 VYRKRKPTSA SSHKRTVKTD HENNNACSES TSTTMDESAS TCTNLSLNSS SSRVHPSSVL 300 FSRFSPQQNQ LFDEQFQMGS SSEEKVVSFS SEQGYKKKHD GCSFYAPGHQ QQQPVVMGEG 360 GGDQTGYSES NSDVSVSESV VNNKKNLYDD RDCDDNGGEK IALPFIDFLG VGAT

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGLQQLHSSV NIMPKKNDSS GGSYKGFSGV NNFLPPPPLS PCFGVLDSPK KRLCVKSEMG  60
FQNLSHPLEK QERRWNFQIS EGTRMDEGFS GGEDEKNVMM MKRSTGEMED DEMFIAEHYN  120
ESGSQSVNNK LCSRGHWRPA EDFKLKELVC QYGPQNWNLI AEKLEGRSGK SCRLRWFNQL  180
DPRINRRAFS EEEEERLLTA HNLYGNKWAM IARLFPGRTD NAVKNHWHVI MARKHREQSS  240
VYRKRKPTSA SSHKRTVKTD HENNNACSES TSTTMDESAS TCTNLSLNSS SSRVHPSSVL  300
FSRFSPQQNQ LFDEQFQMGS SSEEKVVSFS SEQGYKKKHD GCSFYAPGHQ QQQPVVMGEG  360
GGDQTGYSES NSDVSVSESV VNNKKNLYDD RDCDDNGGEK IALPFIDFLG VGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	4e-71	MYB family protein