PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026427345.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 27274.3 Da PI: 7.5481 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.2 | 1e-09 | 25 | 72 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +WT + d+l+ +a+ ++ + +W Ia++++ g+t+ q+ ++q + XP_026427345.1 25 SWTRQQDKLFEQAIVIFPDEndphRWQQIANCVP-GKTASQVYQHYQVL 72 5*****************99**************.************86 PP | |||||||
2 | Myb_DNA-binding | 45.6 | 1.7e-14 | 130 | 174 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + +++G+g+W++I+r ++Rt+ q+ s+ qky XP_026427345.1 130 PWTEEEHRAFLYGLEKFGKGDWRSISRNAVQTRTPTQVASHAQKY 174 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MFQENISMNI YNNQFQSQSQ SPSYSWTRQQ DKLFEQAIVI FPDENDPHRW QQIANCVPGK 60 TASQVYQHYQ VLVRDIQDIE EGRVELPSYY DDVDDNKVIW ETESSPPPLP GTMNNNKTKQ 120 TESERKKGVP WTEEEHRAFL YGLEKFGKGD WRSISRNAVQ TRTPTQVASH AQKYFLRLNA 180 EKKERKRSSI HDITTVEKAS KVSSKPSDCP VQQMRTMDNL IGTYPRQGDY FGCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 1e-60 | MYB family protein |