PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427053.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 331aa    MW: 37617.5 Da    PI: 6.4592
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.92e-173279148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT++Ede+l ++v++ G g+W+t +++ g+ R++k+c++rw +yl
   XP_026427053.1 32 RGPWTPDEDEILSNYVQKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 79
                     89******************************99************97 PP
2Myb_DNA-binding48.32.3e-1586130248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g   ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
   XP_026427053.1  86 GQIGEDEEDLILRLHHLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 130
                      556699***************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MASSSSSVWK NSTTNKSSST KTPCCTKVGL KRGPWTPDED EILSNYVQKE GEGRWRTLPK  60
RAGLLRCGKS CRLRWMNYLR PSVKRGQIGE DEEDLILRLH HLLGNRWSLI AGRIPGRTDN  120
EIKNYWNTHL SKKLISQGID PRTHKPLTNP DPNNHYHEPP PPLFEHTSIS NPKFIHTGHD  180
DSSTSAISSL EMSFSEAIDD KGNDNNRHEY LKGITTLNAD QNHYNLENSD GFMMGFRDME  240
EDLHHHTEFN NDDVFSSFFN SLINDDVYVH QHQQPQQHPT TAKNQVPLLD YTTPVDSSST  300
QSFGYSDVIM ESAYSSPNIT NGNAFNQEML G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-74MYB family protein