PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026426820.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 1862aa MW: 205503 Da PI: 6.4577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026426820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.5	7.3e-09	923	965	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT+eE e +++ + +G++ +++Ia+++ ++t +c+++++k XP_026426820.1 923 NPWTPEEKEVFLEKLAAFGKD-FNRIASCLT-HKTTADCVEFYYK 965 58***************99.****9.*********98 PP
2	Myb_DNA-binding	24.7	5.3e-08	1145	1185	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE + +++a++ + ++ +++I+r++ ++++ qc+ ++ XP_026426820.1 1145 DWTDEEKLVFIRAFRSYSKN-FSKISRCVR-TKSRDQCRIFFS 1185 6***************88.*****.******8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1862 aa Download sequence
MPPEPSTWDR KDFFKEKKYD RLDSVNSRWR GGGGDPHLGG VGGHRGGDFT RWGGGNEDFR 60 RPLVHGKQGG YQIFPEESGY GCTPSRSSER MVEDESSFRS FSSRGGESKY GRSSREVRGS 120 IIHGSPREWR GHPRESGGDV SFNPFGRHHD LTTQRSVSDI ITSHHHSDAE NTLLDPHPFR 180 DEHDKMGGLD ALGTGHRYER DHSLGGSIPW KRSKWNRSSS LSSRGSGFSH SSSSRSIRTD 240 SDEGKTELHP GRVTPLRSPS VETSGDLPTS LNDETCPRKK PRLGWGQGLA KYEKQKVEVP 300 ERKPAENPVQ QPVEKLVEKS VEKPAEKLVQ KFVEKFVEKP VEKLVENSVE EPVEKTEEKP 360 VEKEFYEVLR STGTQSEQEL VLEDASSLKD LPEELPDENP VEKSAEKPDE NPVEKSAEKP 420 DENANSKRPT PTIVITSSDT SPRLTGLSEC SSPPTPSSFA CSSSQGPEDK HLLNCERNDN 480 QTSSSRGSPS CGFLNFVEGF SVNLQHLELT PPLNLNSLLS DLTQPEDVNS GDSNYLRSTV 540 MNKLLLLKSE FLKAVEKTEG EIDKFENELK QLNSEPDTVS VSPATTDALQ LNSGVKSYEV 600 VGADSKVLLK PLQVVSSDDL HSEKTLCDDI MRESHAEVED EIDSPGSATS KFVEQSTGKT 660 DFTSLAKKEK QGNFVALVEE LSCRSPEKNN LPSAEKKSKD ELCIGDTKSV NEMSTFCDAS 720 SELVGHNHDH EKLVEAILAA NKDSARNACE VFNNLLPADG PELEKREVNL DSCQQNNVIL 780 KEKVRARMRL QRFKERALTL KYRALQHMWK EDMHLLSVRK CKLKSQKRVD SSLKFLHNGQ 840 QKHRSSIRSR FTSPGNSTLV PSANIVDFTS KLLSDSRVKV HRSSLKMPAL ILDEKQRKSS 900 MFVSNNGLVE DPLSVEKERV MVNPWTPEEK EVFLEKLAAF GKDFNRIASC LTHKTTADCV 960 EFYYKNHKSE SFEKIKKKMD SRKQVGDLPN TYLMTSGQKW NREANAVSLD VLGAASMVAS 1020 HADDSEKTQQ SSAGRPFLLR HCEYKASSSS DFAAVSKSST SDMLGNEREV VAADVLAGIC 1080 GALSSEAVSS CITSSIDHVE GCLDWKFRRR NLVADDCSLT PEVMQKIYCQ EACSDESCGE 1140 FDSVDWTDEE KLVFIRAFRS YSKNFSKISR CVRTKSRDQC RIFFSKARKS LGLDLIQPGS 1200 DNAGTLLSDD NGGRSDTEDA CGMEIESAIC SLQYCTKMDV DLPLSVANTD DKALERDKTT 1260 HTLAEHHKLC DTEQSDYGDS DPRREVPDDF QAMVTPEGKV MATEKIVQCN GVVKEATLSC 1320 EFPVQAHEGA SFTAETVKEH GVSQPVSLHD DTAPAEQLKV IPVASAEITA ESSIKLHNGG 1380 GDGQYVKDAG VDIKSNRSSA YSSVPESKIN GVVTPGICLT PNYHSENSRD LISSGQAPPV 1440 MFWQQKENFP SVSANLCPRD SVSAHSEGHL GKSTPSSTLN FEKRKRQRSE NDDAYQPQLL 1500 GNGTLNQVES SQILRGYPLK VLNKKEINGA AESNQILHGL YHDTGDALKA PRLLSEMPLL 1560 VRGGHEQRSR SRSRSSSDTE EHSRRNGDVK LFGQILSHPS PVPLSSPLTT NQLTDSKIET 1620 PKLSSSKSSS NLKLINGHAN EGVPSPLKHD ATGNHYGASE YPMRSYGFWD GNKIQMGLPS 1680 IPPDSAILFS KYPTVAFSDF STTSSCVDKQ QQTMLKSKDR NLGSVSVYPT KDVVSSASSH 1740 HHNNSSSSNN NSSRGLADYR KVYRSHDGSK DVMKQRNDMF PQLQKANGCE NLQQQQIQGR 1800 GVVGMLNVMG GGGILVGGVS DPVAAIKMHY AASTAERYGG QVGSVMMMRE EDPCWRGGDI 1860 GR

Sequence ? help Back to Top

Protein Sequence Length: 1862 aa Download sequence

MPPEPSTWDR KDFFKEKKYD RLDSVNSRWR GGGGDPHLGG VGGHRGGDFT RWGGGNEDFR  60
RPLVHGKQGG YQIFPEESGY GCTPSRSSER MVEDESSFRS FSSRGGESKY GRSSREVRGS  120
IIHGSPREWR GHPRESGGDV SFNPFGRHHD LTTQRSVSDI ITSHHHSDAE NTLLDPHPFR  180
DEHDKMGGLD ALGTGHRYER DHSLGGSIPW KRSKWNRSSS LSSRGSGFSH SSSSRSIRTD  240
SDEGKTELHP GRVTPLRSPS VETSGDLPTS LNDETCPRKK PRLGWGQGLA KYEKQKVEVP  300
ERKPAENPVQ QPVEKLVEKS VEKPAEKLVQ KFVEKFVEKP VEKLVENSVE EPVEKTEEKP  360
VEKEFYEVLR STGTQSEQEL VLEDASSLKD LPEELPDENP VEKSAEKPDE NPVEKSAEKP  420
DENANSKRPT PTIVITSSDT SPRLTGLSEC SSPPTPSSFA CSSSQGPEDK HLLNCERNDN  480
QTSSSRGSPS CGFLNFVEGF SVNLQHLELT PPLNLNSLLS DLTQPEDVNS GDSNYLRSTV  540
MNKLLLLKSE FLKAVEKTEG EIDKFENELK QLNSEPDTVS VSPATTDALQ LNSGVKSYEV  600
VGADSKVLLK PLQVVSSDDL HSEKTLCDDI MRESHAEVED EIDSPGSATS KFVEQSTGKT  660
DFTSLAKKEK QGNFVALVEE LSCRSPEKNN LPSAEKKSKD ELCIGDTKSV NEMSTFCDAS  720
SELVGHNHDH EKLVEAILAA NKDSARNACE VFNNLLPADG PELEKREVNL DSCQQNNVIL  780
KEKVRARMRL QRFKERALTL KYRALQHMWK EDMHLLSVRK CKLKSQKRVD SSLKFLHNGQ  840
QKHRSSIRSR FTSPGNSTLV PSANIVDFTS KLLSDSRVKV HRSSLKMPAL ILDEKQRKSS  900
MFVSNNGLVE DPLSVEKERV MVNPWTPEEK EVFLEKLAAF GKDFNRIASC LTHKTTADCV  960
EFYYKNHKSE SFEKIKKKMD SRKQVGDLPN TYLMTSGQKW NREANAVSLD VLGAASMVAS  1020
HADDSEKTQQ SSAGRPFLLR HCEYKASSSS DFAAVSKSST SDMLGNEREV VAADVLAGIC  1080
GALSSEAVSS CITSSIDHVE GCLDWKFRRR NLVADDCSLT PEVMQKIYCQ EACSDESCGE  1140
FDSVDWTDEE KLVFIRAFRS YSKNFSKISR CVRTKSRDQC RIFFSKARKS LGLDLIQPGS  1200
DNAGTLLSDD NGGRSDTEDA CGMEIESAIC SLQYCTKMDV DLPLSVANTD DKALERDKTT  1260
HTLAEHHKLC DTEQSDYGDS DPRREVPDDF QAMVTPEGKV MATEKIVQCN GVVKEATLSC  1320
EFPVQAHEGA SFTAETVKEH GVSQPVSLHD DTAPAEQLKV IPVASAEITA ESSIKLHNGG  1380
GDGQYVKDAG VDIKSNRSSA YSSVPESKIN GVVTPGICLT PNYHSENSRD LISSGQAPPV  1440
MFWQQKENFP SVSANLCPRD SVSAHSEGHL GKSTPSSTLN FEKRKRQRSE NDDAYQPQLL  1500
GNGTLNQVES SQILRGYPLK VLNKKEINGA AESNQILHGL YHDTGDALKA PRLLSEMPLL  1560
VRGGHEQRSR SRSRSSSDTE EHSRRNGDVK LFGQILSHPS PVPLSSPLTT NQLTDSKIET  1620
PKLSSSKSSS NLKLINGHAN EGVPSPLKHD ATGNHYGASE YPMRSYGFWD GNKIQMGLPS  1680
IPPDSAILFS KYPTVAFSDF STTSSCVDKQ QQTMLKSKDR NLGSVSVYPT KDVVSSASSH  1740
HHNNSSSSNN NSSRGLADYR KVYRSHDGSK DVMKQRNDMF PQLQKANGCE NLQQQQIQGR  1800
GVVGMLNVMG GGGILVGGVS DPVAAIKMHY AASTAERYGG QVGSVMMMRE EDPCWRGGDI  1860
GR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1483	1488	KRKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-111	MYB family protein