PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026426427.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 386aa    MW: 42280.9 Da    PI: 8.7895
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026426427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.71.1e-09426225
                    -S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                    k elC +f+r G C+ GdrC+F H
  XP_026426427.1  4 KKELCTHFLR-GSCRLGDRCNFLH 26
                    89********.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MNRKKELCTH FLRGSCRLGD RCNFLHANQQ QSKPNPFEFG SQSSNTNQQQ QKPNPFGFGT  60
QSNSQLNVQS DFGSKNQNQF KPFDNKWNRS SSTASTNPAQ PRKDDKQTQL ATHKCTDPEL  120
CNRQIAEDFQ QERPLWKLTC YGHCKDRPCD IVGDISYEEI RAAAYDDAKR GLPLPSIVER  180
ERNLLKTKIL EFENLLRNPY VISNAVTAGP SSFPTTNLSA PPLNGQTNVP PTVSSFSQLG  240
TSLGPILSKP APPNMTFGQP SVLQNPNQNM GGFGNSNSIF RNQASGGQKS MQPFGSGNSI  300
SNFNSGFGSR GNNPSTVPFP PTSQLPSSSC NQSPFTSSTS RSPVPSMLAQ ASMKTGGVSV  360
NSSIWSKEEW TPGEIPEEAP PAEYIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.14e-71C3H family protein