PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026426027.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YA
Protein Properties Length: 335aa    MW: 36976.5 Da    PI: 7.0956
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026426027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.83.7e-33175231158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekkl +ksrkpylheSRh+hA+rR+Rg+gGrF
  XP_026426027.1 175 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKSRKPYLHESRHQHAMRRARGCGGRF 231
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MHSKPGNVNA SELDEQSIPQ STTCSQPWWR GSVHNTDTST ELGESSSKPS LIEQPDSRME  60
TNAKEIGDGG QNEGGGVTKE MQTTIAPQSG SDGQYGHEHQ NLQLAASTMP PAGGEYHIPR  120
PQFELVGHSI ACATYPYSDP YYAGMMGGLG SQSQVQPHLL GVRHSRMPLP LEISEEPVYV  180
NAKQYHGILR RRQSRAKAEL EKKLIKSRKP YLHESRHQHA MRRARGCGGR FLNTKKPEDS  240
SSMHTTEEGM ASDCNGNHNS SNGRQVVNDS TGQDRQESNS YSNDNTKSCY RHNQGLQLSS  300
FHSLSGERTE EEDCSGQQRG NIQVKQAQSR ALTIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.13e-55NF-YA family protein