PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026425993.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | SRS | ||||||||
Protein Properties | Length: 372aa MW: 39842.7 Da PI: 8.5824 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 193.4 | 7.9e-60 | 147 | 316 | 3 | 152 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa........aeaaskrkrelkskkqsalsst 89 s t++C+dCGnqakkdC+h+RCRtCCksrg+dC+th+kstWv+a++rr+rq + ++++ +++ k++r s++q+a++++ XP_026425993.1 147 SSTKTCHDCGNQAKKDCSHNRCRTCCKSRGYDCSTHIKSTWVSASRRRDRQLISPLGNDDQQQGDvgggtssgSTSGVKKPRLVPSQNQTASHTS 241 57889*********************************************988777766666555789988878888899998877777777777 PP DUF702 90 klssaeskkeletss............lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGl 152 + ++++++++++tss lP++v+++a f+cvrvs + dgeee+aYq+ v+igGhvfkG+Ly++G+ XP_026425993.1 242 TSNNNTPPRSFDTSSshhhqdpsfreaLPKQVKAPAAFKCVRVSPIGDGEEEIAYQAIVKIGGHVFKGFLYNKGI 316 77777889999999999********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MGMVGLRSSD VLFVAPATSF QQHQQNHHDH QDPFYAHDHH HQQQQNPMNN SGNNNNSSTA 60 LGIGVIPLLT TTGSTQLWQN QQTHHNVNYP VVKKPVLINY ENSLNQSNIS IFSNNNNNHG 120 AGNVTIAGFA GGADAGNNAN LSMISSSSTK TCHDCGNQAK KDCSHNRCRT CCKSRGYDCS 180 THIKSTWVSA SRRRDRQLIS PLGNDDQQQG DVGGGTSSGS TSGVKKPRLV PSQNQTASHT 240 STSNNNTPPR SFDTSSSHHH QDPSFREALP KQVKAPAAFK CVRVSPIGDG EEEIAYQAIV 300 KIGGHVFKGF LYNKGIVSGN EGLPNISELH LGGSGKNWPS SSQIIDHSDV YGGAATGLLG 360 SGGMSFRIPA IN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12330.1 | 9e-59 | SRS family protein |