PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026425763.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 35168.1 Da PI: 9.4129 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.4 | 1.2e-11 | 40 | 84 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 rWT+eE +++ +a +q+ ++ +W +Ia +++ g+t +++ + XP_026425763.1 40 RWTQEENKRFENALAQYDKDtpdRWQKIALMIP-GKTVNDVMKQYK 84 9********************************.*******98876 PP | |||||||
2 | Myb_DNA-binding | 43.1 | 9.9e-14 | 142 | 186 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + kq+G+g+W+ I+r + Rt+ q+ s+ qky XP_026425763.1 142 PWTEDEHRLFLLGLKQYGKGDWRNISRNFVVSRTPTQVASHAQKY 186 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MMKWGMEILS PQSYLPVSNW LLEENNNGNN NNHSNNKSTR WTQEENKRFE NALAQYDKDT 60 PDRWQKIALM IPGKTVNDVM KQYKELEDDV GYIEAGLVPI PGYTTSSFTL DWVNSRSFDG 120 SNGGKRSSST RPGDQERKKG VPWTEDEHRL FLLGLKQYGK GDWRNISRNF VVSRTPTQVA 180 SHAQKYFIRQ LSGGKDKRRS SIHDITTVNL ADNRPPSPDS TTSTIDQSTM LTQQPNQNSA 240 PKALFDWNQP HDMVFNPAHG SLYVPPTYGI NSFGMKMQGH NLNRNSLHGS HMGAHNAMFQ 300 MQSSQCHPHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-102 | MYB family protein |