PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424632.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 427aa MW: 47052.2 Da PI: 8.497

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	80.2	1.9e-25	159	202	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs++v++g+k+CErH+hrgr+rsrk++e XP_026424632.1 159 DPEPGRCRRTDGKKWRCSKDVVSGQKYCERHMHRGRNRSRKPVE 202 79***************************************997 PP
2	QLQ	50.5	6.3e-18	87	120	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +F+ aQ+q+L+ Q+l++Ky++a++ vP+eLlq+i XP_026424632.1 87 SFSLAQWQELELQALIFKYMLAGATVPSELLQPI 120 8********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MDYYHLRDWR NQQHESDHAA KIPRLFLDQP HQEAASESSS ALPLFVPDHE HHHHHHHQQL 60 GNRSIISNLS AFPDSTNTSR VSRMIGSFSL AQWQELELQA LIFKYMLAGA TVPSELLQPI 120 VKKSLFNNPP PSPFFLHQQY QHYQPTMLQS GYWGRTSVDP EPGRCRRTDG KKWRCSKDVV 180 SGQKYCERHM HRGRNRSRKP VEISTRPIIT NNPSSSVTIA SVGNSNGLIK SANNTTAPVA 240 ALPLTAMGNA NKNGGNAFVI SCGPSSNSSP SMDLLHLNQR YCESERRSND SSVLGDDGRT 300 DGQVLRHFFD DWPKKSQHQP TNGVGNRADG RTSSTCLSIS IENGEEHPKP SSDFSLKLAT 360 GVEDESGKGN CRDERSQVMN WGGMSNSMGG GPLAEALRSS SNASSPTSVL HPPPQVSGSE 420 SSSIITK

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MDYYHLRDWR NQQHESDHAA KIPRLFLDQP HQEAASESSS ALPLFVPDHE HHHHHHHQQL  60
GNRSIISNLS AFPDSTNTSR VSRMIGSFSL AQWQELELQA LIFKYMLAGA TVPSELLQPI  120
VKKSLFNNPP PSPFFLHQQY QHYQPTMLQS GYWGRTSVDP EPGRCRRTDG KKWRCSKDVV  180
SGQKYCERHM HRGRNRSRKP VEISTRPIIT NNPSSSVTIA SVGNSNGLIK SANNTTAPVA  240
ALPLTAMGNA NKNGGNAFVI SCGPSSNSSP SMDLLHLNQR YCESERRSND SSVLGDDGRT  300
DGQVLRHFFD DWPKKSQHQP TNGVGNRADG RTSSTCLSIS IENGEEHPKP SSDFSLKLAT  360
GVEDESGKGN CRDERSQVMN WGGMSNSMGG GPLAEALRSS SNASSPTSVL HPPPQVSGSE  420
SSSIITK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	9e-46	GRF family protein