PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424382.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 407aa MW: 44076.8 Da PI: 8.1033

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.6e-17	52	97	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed +l ++v ++G ++W++Iar ++ gR++k+c++rw + XP_026424382.1 52 KGPWSPDEDAILSRLVSKFGARNWSLIARGIP-GRSGKSCRLRWCNQ 97 79****************************.*********985 PP
2	Myb_DNA-binding	55.6	1.2e-17	104	148	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eEd l+++a++ +G++ W++Iar ++ gRt++ +k++w++ XP_026424382.1 104 RKPFTEEEDMLIIKAHAVHGNR-WAAIARILQ-GRTDNAIKNHWNST 148 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MNQNEEIAAV NGGVTGGDKE NLISNDGGAA GVVGVGSGLV NLGGGTRDDK VKGPWSPDED 60 AILSRLVSKF GARNWSLIAR GIPGRSGKSC RLRWCNQLDP ILKRKPFTEE EDMLIIKAHA 120 VHGNRWAAIA RILQGRTDNA IKNHWNSTLR RRCIESGQYR GTLTSGTMED VSQDKTKASS 180 EDTLSCGDVN SSKSLEGKDI VVNSIENAPN QFLERTHAVV DQMKPKEAPT LFRPVGRVSA 240 FSAYNPLRSS TTDSMCSRVV PRPGPLVQGP KPDVGICQLL ERVRGDPLVP CHCGYSCCNG 300 GARVESQNSL LGPEFVEFVE PPSFSAHDLA LLATDISNMA WIKSGVGQIL DNESASRGIP 360 IQAGTLIENR RNDHLRFEEG RNKLRGTMSE ALSTQMSMQQ FALPAKS

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MNQNEEIAAV NGGVTGGDKE NLISNDGGAA GVVGVGSGLV NLGGGTRDDK VKGPWSPDED  60
AILSRLVSKF GARNWSLIAR GIPGRSGKSC RLRWCNQLDP ILKRKPFTEE EDMLIIKAHA  120
VHGNRWAAIA RILQGRTDNA IKNHWNSTLR RRCIESGQYR GTLTSGTMED VSQDKTKASS  180
EDTLSCGDVN SSKSLEGKDI VVNSIENAPN QFLERTHAVV DQMKPKEAPT LFRPVGRVSA  240
FSAYNPLRSS TTDSMCSRVV PRPGPLVQGP KPDVGICQLL ERVRGDPLVP CHCGYSCCNG  300
GARVESQNSL LGPEFVEFVE PPSFSAHDLA LLATDISNMA WIKSGVGQIL DNESASRGIP  360
IQAGTLIENR RNDHLRFEEG RNKLRGTMSE ALSTQMSMQQ FALPAKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	1e-94	MYB family protein