PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026423515.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 314aa    MW: 34986.5 Da    PI: 6.8534
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026423515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.11.3e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd  l+++ ++ G+g +W + +++ g++R++k+c++rw++yl
   XP_026423515.1 14 RGPWSPEEDATLINYLEKNGTGgNWISLPQKAGLKRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
2Myb_DNA-binding45.61.6e-1469111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T+eEd+++  + k lG++ W+ Ia++++ gRt++++k++w++
   XP_026423515.1  69 GGFTEEEDKIIFSLYKSLGSR-WSVIASKLQ-GRTDNDVKNYWNT 111
                      569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGRAPCCDKA NVKRGPWSPE EDATLINYLE KNGTGGNWIS LPQKAGLKRC GKSCRLRWLN  60
YLRPDIKHGG FTEEEDKIIF SLYKSLGSRW SVIASKLQGR TDNDVKNYWN TKLKKKFFGK  120
PIHHNSNMAT TSNSTQHIQL SSSSDHVNNS SYGFSNQNYS STLPFVQVHG QDEGIVKTEQ  180
PIHHFPLPRL MEPSEFDYNI VSSSTTSHQQ EVSGSGVVPL LPTSSTSSIG FSDNYMSYSG  240
GNNNDLSATT TTVESYDDGF LMGFGLNYPY SSYDFLQDFS NNFHEKTSEE EVVASNSTNG  300
SRTFYASFTS SVTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.12e-75MYB family protein