PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422967.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 1022aa MW: 112517 Da PI: 5.5437

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422967.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.4e-17	47	93	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_026422967.1 47 KGQWTAEEDTILCRAVQRFKGRNWKKIAECFK-DRTDVQCLHRWQKVL 93 799**************************9.**********986 PP
2	Myb_DNA-binding	62	1.2e-19	99	145	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde +v++vk++G + W+tIa+ ++ gR +kqc++rw+++l XP_026422967.1 99 KGPWSKEEDEVIVELVKKHGAKKWSTIAQALP-GRIGKQCRERWHNHL 145 79****************************.***********97 PP
3	Myb_DNA-binding	46.8	6.8e-15	151	193	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE+ l++a++ +G++ W+ + ++ gRt++++k++w+ XP_026422967.1 151 KEAWTQEEEVALIHAHQIYGNK-WAELTKFLP-GRTDNMIKNHWN 193 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1022 aa Download sequence
MESDRNLGDG GAETHVTAPV EGSNQNGLQR TRTSHGRTSG PTRRSTKGQW TAEEDTILCR 60 AVQRFKGRNW KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI VELVKKHGAK 120 KWSTIAQALP GRIGKQCRER WHNHLNPNIN KEAWTQEEEV ALIHAHQIYG NKWAELTKFL 180 PGRTDNMIKN HWNSSVKKKL DSYLASGLLA QFQGLPHVGN PNQYPPSSSR AQNSGRDDSC 240 LKDGSEMEEV SECSQPSTAH ACSQTDNNMD NSYIPVHSQD DFRLTEEFGH IESQTSNPSC 300 SQQYYTTLEE VACAGREIPC GQATSVKSPA HNFMCHSGNS EYFLQEPSAF FEPSRHCTTG 360 AKENLETGSL MSGGSSMEHN VVRADNQEQA SMSQTDRSGV FNSEEGTNGC FSSVNGHSNA 420 MICRSDSQNS ETVRSLAPQP YYPLNSSDML ATYCGEPLMN YSSLLCAGEG TVSFGNKCSG 480 MRDMPSGIQD PEAFTSSCDG FIYPEAGCSN SPCDDDIEKD CLPSNPKWVK DASKPVPVDI 540 FASLNLDGVE THTSVDKGRK HDVEDPDQGT LFYEPPRFPS LDLPFLSCDL IQSGGDLQQA 600 YSPLGIRQHT MSSMNCYSPY RLFDSPSRDD SPDGVLKSAA KSFQGTPSIL KKRPREFFSP 660 LQDRKCGKKH DGKMNSSESP GLDVVFDENV VGNITLSAIK SVLFSPPNNH KNHLGVSTSD 720 KENVDHGGVS SSDGRILENA SETGPRRNQE ADDRLVASDT MDLGDTTEMV QQPSRVLVEH 780 NINDRVFFSP DRERYPTNRV FNAQSPKDQH SRSLETSSAQ NAQSGRSEHC SVNVFVSPAS 840 ERRNGRRLVP ATSAQCFPLS LPLEVASKNA AIDGDTENIS LFSGTPSIKK GFESPSAWKS 900 PWFMNSFLPG PRVDTDITIE DIGYFMSPGE RSYDALGLMQ QLREQTAAVV AEAHEVLASG 960 QKDPPDGKLC DQENSGNELL TERRVLDFSE CGTPGKGTEN RRSAGATSVS FSSPSYLMKG 1020 CR

Sequence ? help Back to Top

Protein Sequence Length: 1022 aa Download sequence

MESDRNLGDG GAETHVTAPV EGSNQNGLQR TRTSHGRTSG PTRRSTKGQW TAEEDTILCR  60
AVQRFKGRNW KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI VELVKKHGAK  120
KWSTIAQALP GRIGKQCRER WHNHLNPNIN KEAWTQEEEV ALIHAHQIYG NKWAELTKFL  180
PGRTDNMIKN HWNSSVKKKL DSYLASGLLA QFQGLPHVGN PNQYPPSSSR AQNSGRDDSC  240
LKDGSEMEEV SECSQPSTAH ACSQTDNNMD NSYIPVHSQD DFRLTEEFGH IESQTSNPSC  300
SQQYYTTLEE VACAGREIPC GQATSVKSPA HNFMCHSGNS EYFLQEPSAF FEPSRHCTTG  360
AKENLETGSL MSGGSSMEHN VVRADNQEQA SMSQTDRSGV FNSEEGTNGC FSSVNGHSNA  420
MICRSDSQNS ETVRSLAPQP YYPLNSSDML ATYCGEPLMN YSSLLCAGEG TVSFGNKCSG  480
MRDMPSGIQD PEAFTSSCDG FIYPEAGCSN SPCDDDIEKD CLPSNPKWVK DASKPVPVDI  540
FASLNLDGVE THTSVDKGRK HDVEDPDQGT LFYEPPRFPS LDLPFLSCDL IQSGGDLQQA  600
YSPLGIRQHT MSSMNCYSPY RLFDSPSRDD SPDGVLKSAA KSFQGTPSIL KKRPREFFSP  660
LQDRKCGKKH DGKMNSSESP GLDVVFDENV VGNITLSAIK SVLFSPPNNH KNHLGVSTSD  720
KENVDHGGVS SSDGRILENA SETGPRRNQE ADDRLVASDT MDLGDTTEMV QQPSRVLVEH  780
NINDRVFFSP DRERYPTNRV FNAQSPKDQH SRSLETSSAQ NAQSGRSEHC SVNVFVSPAS  840
ERRNGRRLVP ATSAQCFPLS LPLEVASKNA AIDGDTENIS LFSGTPSIKK GFESPSAWKS  900
PWFMNSFLPG PRVDTDITIE DIGYFMSPGE RSYDALGLMQ QLREQTAAVV AEAHEVLASG  960
QKDPPDGKLC DQENSGNELL TERRVLDFSE CGTPGKGTEN RRSAGATSVS FSSPSYLMKG  1020
CR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	1e-179	MYB family protein