PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422543.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 795aa MW: 88137.2 Da PI: 6.2741

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.2	1.8e-08	40	89	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwq 45 +++WT+eE e l +v+++G g W+ I + Rt + k++++ XP_026422543.1 40 KKKWTKEENEALEAGVEKHGFGKWSEIKKDPSyadilSERTNVDFKDKFR 89 689************************98766666655566666555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 795 aa Download sequence
MASKPNSETT SLLFTVSEER RAVLTGNVEV VTPNTTVVKK KKWTKEENEA LEAGVEKHGF 60 GKWSEIKKDP SYADILSERT NVDFKDKFRN VHDSEKLALQ RASRKEVKKQ KEIERRLAFA 120 TAVAEAAVSI EDSDPNLFEI EKVNESLMDR RITVRGVVAS TTHVIKEIGS VVLKEGEFTI 180 KCVLNTADNL IRPQDAKDVT NFAEHSYLAF QGVVSLPSTR IKGSMKNISQ KVVLQVSQIY 240 GIGKTLPPAP VETDTSARSE AVIEKDMEVG EPSRVSDVPA PANQKRVQAF VSALAEAAVS 300 IEDSDPNLFP VEKVDESMFG RKISVRGEVA STIHVHRRIG SVVLKEGEFS IRCVLNTADD 360 LIGLQDAKDV TNLAEHSYLA LEGVVSLPDT RVQGSMKDLS QQVVILVGKI YGIGKTLPPA 420 PVETNTAARS EAFVEKPMEV GVPSRVSDVL ELVNQGILRI QSCAELVLRE FFSSRKFIGM 480 RTQKLIAGSS SGAPFCKLNW EGYPTCLAHS PQFARQMAIR GGSERVFEIG PVFKEDSISK 540 QLCEYTGVDV EMRIDRHYFE VVEFVESLFV DMFNKLHEKC KEDFQAIQNQ HPYEKLKYFQ 600 FNAKVPFDVG LQLLENAGTK VIHPLRGLNP EEERKLGKIV LEEYETEFYI LYDCPSAGST 660 FYTKQSPDVH HSSNSFDVFL RGKKILSGGE REIDPDALYS RAADLKISGT DLGDWDSVCT 720 YIEAFQCTMP RHGGFGVDLN QVTTMLFSTN DTDKAGVDGK EAAVKGIEAA GVQSKDGKDT 780 SRKARNKARV KDKGK

Sequence ? help Back to Top

Protein Sequence Length: 795 aa Download sequence

MASKPNSETT SLLFTVSEER RAVLTGNVEV VTPNTTVVKK KKWTKEENEA LEAGVEKHGF  60
GKWSEIKKDP SYADILSERT NVDFKDKFRN VHDSEKLALQ RASRKEVKKQ KEIERRLAFA  120
TAVAEAAVSI EDSDPNLFEI EKVNESLMDR RITVRGVVAS TTHVIKEIGS VVLKEGEFTI  180
KCVLNTADNL IRPQDAKDVT NFAEHSYLAF QGVVSLPSTR IKGSMKNISQ KVVLQVSQIY  240
GIGKTLPPAP VETDTSARSE AVIEKDMEVG EPSRVSDVPA PANQKRVQAF VSALAEAAVS  300
IEDSDPNLFP VEKVDESMFG RKISVRGEVA STIHVHRRIG SVVLKEGEFS IRCVLNTADD  360
LIGLQDAKDV TNLAEHSYLA LEGVVSLPDT RVQGSMKDLS QQVVILVGKI YGIGKTLPPA  420
PVETNTAARS EAFVEKPMEV GVPSRVSDVL ELVNQGILRI QSCAELVLRE FFSSRKFIGM  480
RTQKLIAGSS SGAPFCKLNW EGYPTCLAHS PQFARQMAIR GGSERVFEIG PVFKEDSISK  540
QLCEYTGVDV EMRIDRHYFE VVEFVESLFV DMFNKLHEKC KEDFQAIQNQ HPYEKLKYFQ  600
FNAKVPFDVG LQLLENAGTK VIHPLRGLNP EEERKLGKIV LEEYETEFYI LYDCPSAGST  660
FYTKQSPDVH HSSNSFDVFL RGKKILSGGE REIDPDALYS RAADLKISGT DLGDWDSVCT  720
YIEAFQCTMP RHGGFGVDLN QVTTMLFSTN DTDKAGVDGK EAAVKGIEAA GVQSKDGKDT  780
SRKARNKARV KDKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49850.1	2e-11	MYB_related family protein