PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422370.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 499aa MW: 54941.1 Da PI: 6.5743

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.4	6.8e-13	23	67	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed++l + + G+++W+ Ia+++ +t qc+ rw++yl XP_026422370.1 23 TWTQQEDDILREQISINGTENWAIIANKFK-DKTTRQCRRRWYTYL 67 6**************************9.***********97 PP
2	Myb_DNA-binding	27.3	8.5e-09	73	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd l +a k +G++ W+ Ia+ + ++ +k+r+ + XP_026422370.1 73 KGGWSPEEDMVLCEAQKIFGNR-WTEIAKVVS----DNAVKNRFTT 113 688*****************.****8....99**9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MKHQETRNLK SESAKQKERH IVTWTQQEDD ILREQISING TENWAIIANK FKDKTTRQCR 60 RRWYTYLNSD FKKGGWSPEE DMVLCEAQKI FGNRWTEIAK VVSDNAVKNR FTTLCKKRAK 120 HETILKENKS LCTNPNNKRV LFQNGLVTDG TSESTAPLKK MRTNISDVAE NCDHEGRLLG 180 LCGTTDAQQL RPPFAVIFPK SHGVDNLPTQ QHVSNTISVT STDVGKSNGQ ATFLKRNDPR 240 ITVLMQQAEL LSSLAAKVNS EGNNQSLDNA WKELQDFLNR NHKSNQLQSE LPDTDFHLEG 300 LKELIEDLRS NTFGGHLHWR QQDLHEESSG SSGNSTESTL QSSAGEKIEL PQGEVCSLYQ 360 ATGVEPQSIT LLESDGTGGE DGFLCSGVAN VGAGNNADAG GSEEFHTGTV VTQVGLLASS 420 AEPKGTDQLV PAMSNAEFSS PVKVTPLFRS FGAAIPTPLF SESERNFLLK TFGSASSPPN 480 PSSNHSQPPP CKRSLLQSL

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MKHQETRNLK SESAKQKERH IVTWTQQEDD ILREQISING TENWAIIANK FKDKTTRQCR  60
RRWYTYLNSD FKKGGWSPEE DMVLCEAQKI FGNRWTEIAK VVSDNAVKNR FTTLCKKRAK  120
HETILKENKS LCTNPNNKRV LFQNGLVTDG TSESTAPLKK MRTNISDVAE NCDHEGRLLG  180
LCGTTDAQQL RPPFAVIFPK SHGVDNLPTQ QHVSNTISVT STDVGKSNGQ ATFLKRNDPR  240
ITVLMQQAEL LSSLAAKVNS EGNNQSLDNA WKELQDFLNR NHKSNQLQSE LPDTDFHLEG  300
LKELIEDLRS NTFGGHLHWR QQDLHEESSG SSGNSTESTL QSSAGEKIEL PQGEVCSLYQ  360
ATGVEPQSIT LLESDGTGGE DGFLCSGVAN VGAGNNADAG GSEEFHTGTV VTQVGLLASS  420
AEPKGTDQLV PAMSNAEFSS PVKVTPLFRS FGAAIPTPLF SESERNFLLK TFGSASSPPN  480
PSSNHSQPPP CKRSLLQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-143	MYB family protein