PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026420672.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family E2F/DP
Protein Properties Length: 326aa    MW: 34643.9 Da    PI: 9.0411
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026420672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP76.82.1e-24105182471
         E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++Lr+++ k   ++ek+e+  ++t+neva+eLv+e            ++kn+rRR+YD+lNVL+a+++i+k e +ei w+g
  XP_026420672.1 105 RGLRQFSVK---VCEKVEAkVRTTYNEVADELVAEfstqtpdnpqnfEEKNIRRRVYDALNVLMAMDIISKDENKEIIWRG 182
                     79*******...*******999*************************99******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MVIKAAANQE NWGKNQGRFM NGGGCSSVSG GGAAAATGGG GKSMSTSGSV GSSPSSKTLN  60
RLHHLDIQAA AADDAGSPGA ISGKKKKRAQ AGGGGGYNKA TGGGRGLRQF SVKVCEKVEA  120
KVRTTYNEVA DELVAEFSTQ TPDNPQNFEE KNIRRRVYDA LNVLMAMDII SKDENKEIIW  180
RGLSGAGAGE ELKVQRLGLR NRIANKAAHL QELGEQFAGL QNLIQKNKQL CCSGNAAAAS  240
KGGVPLPFIL VQMRPHATVE VEISEDTQLV HFDFNNAPFE LHDDSFVLKS MGLCDGSPEK  300
NQICTQESAS NRMSQTPQVN RQLRPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.15e-89E2F/DP family protein