PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026419747.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 482aa MW: 54873.5 Da PI: 7.8823

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026419747.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.1e-17	203	249	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd llv++v q+G++ W+ Ia+t+ gR +kqc++rw+++l XP_026419747.1 203 KGQWTMEEDRLLVHLVGQFGMRKWSQIAQTLR-GRIGKQCRERWHNHL 249 799***************************.***********97 PP
2	Myb_DNA-binding	49.6	8.8e-16	255	297	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ WT++Ed +l++ + + G++ W+ Ia++++ gRt++++k++w+ XP_026419747.1 255 KDVWTEDEDRILIQSHIEIGNK-WAEIAKRLP-GRTENSIKNHWN 297 578*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MEFEPRYGED FLYKQNILGE NYLKPEFGYG FPMGACNDSG GVIQEIPKLD QFSLDGCFRN 60 SNLGMSNPSP PLPPSTKYVD SPSQVFSNGN SIMQDFDVFE YKPLLEGGGS TNNSSNVSNG 120 GLFHQNKGFF HYPSIMDRNH PSHLSPTLSF QELEQGNLSI PDEFSCITAD NGIYGETAVK 180 KRNSPEKRRS AVKGTQRRSN VIKGQWTMEE DRLLVHLVGQ FGMRKWSQIA QTLRGRIGKQ 240 CRERWHNHLR PNIKKDVWTE DEDRILIQSH IEIGNKWAEI AKRLPGRTEN SIKNHWNATK 300 RRQFSRRRCR SSKYPRSSSL LQNYIKSLGA DPASASNTEY RKNAFVTSNT PIEANSNTAA 360 TTNIDSTKMP MSTQPALMKQ PADRSQQKLD MFNNLSEDRL VPSYDFNDVT GFGFDTKTFP 420 VKYSLGSLFD EMPSGNIFGD DQNMEINMPA EMDLYMQQNH HEVKREMDLV EMVNQTTTGR 480 MC

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MEFEPRYGED FLYKQNILGE NYLKPEFGYG FPMGACNDSG GVIQEIPKLD QFSLDGCFRN  60
SNLGMSNPSP PLPPSTKYVD SPSQVFSNGN SIMQDFDVFE YKPLLEGGGS TNNSSNVSNG  120
GLFHQNKGFF HYPSIMDRNH PSHLSPTLSF QELEQGNLSI PDEFSCITAD NGIYGETAVK  180
KRNSPEKRRS AVKGTQRRSN VIKGQWTMEE DRLLVHLVGQ FGMRKWSQIA QTLRGRIGKQ  240
CRERWHNHLR PNIKKDVWTE DEDRILIQSH IEIGNKWAEI AKRLPGRTEN SIKNHWNATK  300
RRQFSRRRCR SSKYPRSSSL LQNYIKSLGA DPASASNTEY RKNAFVTSNT PIEANSNTAA  360
TTNIDSTKMP MSTQPALMKQ PADRSQQKLD MFNNLSEDRL VPSYDFNDVT GFGFDTKTFP  420
VKYSLGSLFD EMPSGNIFGD DQNMEINMPA EMDLYMQQNH HEVKREMDLV EMVNQTTTGR  480
MC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	3e-70	MYB family protein