PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026419193.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 398aa MW: 43868.7 Da PI: 6.8328

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026419193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	6.7e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl XP_026419193.1 16 KGPWTPEEDQKLLAYIEEHGHGSWRSLPSKAGLQRCGKSCRLRWTNYL 63 79********************************************97 PP
2	Myb_DNA-binding	51.7	2e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_026419193.1 69 RGKFSLQEEQSIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 114 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MTGRSAACCE KLGLKKGPWT PEEDQKLLAY IEEHGHGSWR SLPSKAGLQR CGKSCRLRWT 60 NYLRPDIKRG KFSLQEEQSI IQLHALLGNR WSAIATHLPK RTDNEIKNYW NTHLKKRLAK 120 LGIDPVTHKP KNATLSSIDG PSKNESNLSH MAQWESARLE AEARLVRDSK LRSHSSFKLQ 180 LTQLGSSSSA ACQAGPNWHG TMWSSKSNKV SAGLDDSPTS TMTFSEQNLS LPAALAVGLS 240 DHDTALNNEF VGAGSSNSHE RSVVLAVKEE RNEEELKSIG KSSHFLNIPD IVLFPNAYHH 300 EGTQWKYGHA SKSAGDVGND APMVDDDNVN LPAAGNNNFI NGFTELLINH DRPNITSSSS 360 DNGECTDDNG YEQEVSKDYW NNILDLVNSS PSDAPPVF

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MTGRSAACCE KLGLKKGPWT PEEDQKLLAY IEEHGHGSWR SLPSKAGLQR CGKSCRLRWT  60
NYLRPDIKRG KFSLQEEQSI IQLHALLGNR WSAIATHLPK RTDNEIKNYW NTHLKKRLAK  120
LGIDPVTHKP KNATLSSIDG PSKNESNLSH MAQWESARLE AEARLVRDSK LRSHSSFKLQ  180
LTQLGSSSSA ACQAGPNWHG TMWSSKSNKV SAGLDDSPTS TMTFSEQNLS LPAALAVGLS  240
DHDTALNNEF VGAGSSNSHE RSVVLAVKEE RNEEELKSIG KSSHFLNIPD IVLFPNAYHH  300
EGTQWKYGHA SKSAGDVGND APMVDDDNVN LPAAGNNNFI NGFTELLINH DRPNITSSSS  360
DNGECTDDNG YEQEVSKDYW NNILDLVNSS PSDAPPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-112	MYB family protein