PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026419094.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 282aa    MW: 30560.1 Da    PI: 9.5812
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026419094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding452.5e-1491135347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_026419094.1  91 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 135
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MSGNCSESSG CVVNGGGGGD ELATGGFMLF GVRVLTEGSF RKSVSLNNLS QYEQVQQELA  60
AADQEQNVVH ATGYVSDDVA APSRERKRGV PWTEEEHKLF LLGLQKVGKG DWRGISRNFV  120
KTRTPTQVAS HAQKYFLRRN NLNRRRRRSS LFDITTDTFM GEEESSTVCH QEEMNKLVTL  180
ATGNLQVQEA SSSKIIRPKP VLPIPPPASR MTNLNLNVKS TVNPSSVSLI LSSSPPTSSS  240
FSTTSDLSRQ SSSRQNSAFK SMSSTGCFSS GDNNSGNIIS VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.21e-50MYB_related family protein