PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026418861.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 385aa MW: 42313.9 Da PI: 9.263 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 31.7 | 2.6e-10 | 4 | 26 | 2 | 25 |
-S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaH 25 k elC +f+r G C++GdrC+F H XP_026418861.1 4 KKELCTHFLR-GSCRFGDRCNFLH 26 89********.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence |
MNRKKELCTH FLRGSCRFGD RCNFLHANQQ QSKPNNPFGF GSQSSNTNQQ QQKPNPFGFG 60 TQSNSQLNVQ SDFGSKNQNQ FKPFDNKWNR SSSTASTNPA QPRKDDKQTQ LATHKCTDPE 120 LCKRQIAEDF QQERPLWKLT CYGHCKDRPC DIVGDISYEE IRAAAYDDAK RGLPLPSIVE 180 RERNLLKTKI LEFENLLRNP YVISNAVTAG PSSFPTTNLS APPLNVQTNV PPTVSSFSQL 240 GTSLGPILSK PAPPNMTFGQ PSVFHNPSQN MGGFGNSNSI FRNQGGQKSM QPFESGTSIS 300 KFNSGFGSRG NNPSTVPFPP TSQLPSSSSN QSPFTSSTSR SPVPSMLGQA SMKTGGVSVN 360 SSIWSKEEWT PGEIPEEAPP AEYIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75340.1 | 4e-75 | C3H family protein |