PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418654.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 375aa MW: 42998.7 Da PI: 10.0513

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.5e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ + R +k+c +rw +yl XP_026418654.1 4 RQRWRAEEDSLLRAYVKQYGPREWNLVSQRMNtpLDRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.3	1.3e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_026418654.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MKERQRWRAE EDSLLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENSKSTDP 120 IDEGKYDRIL ETFAEKLVRE RSTPTPSPTP SFFMATSNAG FLHSDAATAA APPPPQPTLL 180 PPWLSNSNGP LTTSSSPSVT LSLSPSTSAP SPTIPWLQPE RTGTDNSNNN NNSSLMLSNL 240 APHGSVSTNG ERLIVTELSD CCRELEEGHR AWAAHKKEAT WRLKRVELQL ESEKACRKRE 300 KMEEIEMKVR ALREEQKVSL ERIEAEYREQ LAGLRRDADA KEHKLADQWA AKHIRLMKFV 360 EQIGRQRPSI ESNCR

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MKERQRWRAE EDSLLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENSKSTDP  120
IDEGKYDRIL ETFAEKLVRE RSTPTPSPTP SFFMATSNAG FLHSDAATAA APPPPQPTLL  180
PPWLSNSNGP LTTSSSPSVT LSLSPSTSAP SPTIPWLQPE RTGTDNSNNN NNSSLMLSNL  240
APHGSVSTNG ERLIVTELSD CCRELEEGHR AWAAHKKEAT WRLKRVELQL ESEKACRKRE  300
KMEEIEMKVR ALREEQKVSL ERIEAEYREQ LAGLRRDADA KEHKLADQWA AKHIRLMKFV  360
EQIGRQRPSI ESNCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-136	MYB family protein