PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418373.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 349aa MW: 40836.5 Da PI: 9.2894

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.9	3.1e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rWT eEd +l +vkq+G++ W++++++m+ +R +k+c +rw +yl XP_026418373.1 4 RQRWTSEEDAILRAYVKQYGPREWNLVSERMNvsIHRDAKSCLERWKNYL 53 89******************************99**********97 PP
2	Myb_DNA-binding	33.6	8.9e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T++E+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_026418373.1 59 KGSLTEDEQCLVIHLQAKHGNK-WKKIAAEVP-GRTAKRLAKWWEVF 103 57789***************.*****.*******99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MKDRQRWTSE EDAILRAYVK QYGPREWNLV SERMNVSIHR DAKSCLERWK NYLKPGIKKG 60 SLTEDEQCLV IHLQAKHGNK WKKIAAEVPG RTAKRLAKWW EVFKEKQQRE QKESTSSLEP 120 IEEGKYDRIL ETFAQKLVNQ RQTPQFVMTT APNGAFLHSG PPTPPTPTLL PPWLSTSNGL 180 PTNTRPLSPS VTLTLSPSTV DPAPTIPWLH PERGLNCTLP PSHGRDNQIV NELVEYCREL 240 EEGHRVWAEH KKEAEWRVRR MELQLESEKV NKRREKMEDI ESKIRALREE EKVILERIDY 300 EYKEQLTGLK RDAESKEQKL AEQWFAKHMR LTKFLEQRSC VSSPNDPNF

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MKDRQRWTSE EDAILRAYVK QYGPREWNLV SERMNVSIHR DAKSCLERWK NYLKPGIKKG  60
SLTEDEQCLV IHLQAKHGNK WKKIAAEVPG RTAKRLAKWW EVFKEKQQRE QKESTSSLEP  120
IEEGKYDRIL ETFAQKLVNQ RQTPQFVMTT APNGAFLHSG PPTPPTPTLL PPWLSTSNGL  180
PTNTRPLSPS VTLTLSPSTV DPAPTIPWLH PERGLNCTLP PSHGRDNQIV NELVEYCREL  240
EEGHRVWAEH KKEAEWRVRR MELQLESEKV NKRREKMEDI ESKIRALREE EKVILERIDY  300
EYKEQLTGLK RDAESKEQKL AEQWFAKHMR LTKFLEQRSC VSSPNDPNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-135	MYB family protein