PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417907.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NF-X1

Protein Properties

Length: 870aa MW: 97604.5 Da PI: 8.3575

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	22.2	3e-07	236	255	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H+C+ +CH G CppC++ XP_026417907.1 236 CGVHRCNVICHQGLCPPCKA 255 ******************95 PP
2	zf-NF-X1	17.2	1.1e-05	396	415	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H C + C+ G+CppC++ XP_026417907.1 396 CGRHACRRRCCDGDCPPCSE 415 ******************85 PP
3	zf-NF-X1	17.9	6.7e-06	423	442	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 C +HkC ++CH+G C pCp+ XP_026417907.1 423 CNNHKCPSPCHRGACAPCPL 442 668***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MAATEIQHYP VSDSDNDSDN GKDELRHTDL EETIFKSYLQ LNTENSSSSQ PDLSKIKSFL 60 NSSRSGALSC MICLERIRLT DPTWSCYKEC YAVFHLICIQ SWARQASDLA AARAASRLST 120 EHFPLAGANA ANWNCPKCRV EYSKTLIPSK YLCYCGKTQD PDSDPWILPH SCGEVCERPL 180 KYECGHYCLL LCHPGPCPAC PKLVKNRCFC GKIEDVKRCG FKDFTCNRVC EKKLDCGVHR 240 CNVICHQGLC PPCKAKGVYK CQCGKFEQER ECFEREFKCE NECGKLLGCG KHVCERGCHE 300 GMCGGCPYQG KRSCPCGKRV YEGMPCDTVL PTCGSTCEKM LSCGIHRCPE RCHKGSCNET 360 CRTVIIKSCR CGSLRKQVPC HQALACERKC NRGRDCGRHA CRRRCCDGDC PPCSEICDRK 420 LRCNNHKCPS PCHRGACAPC PLMVTISCSC GETRFEVPCG TEREQKPPKC PKRCSISPLC 480 RHAPKRKPHK CHYGACPPCR LVCEEEYPCG HNCKLRCHGP EPPPNPEFTL KSKKKKSNRK 540 PECTPGTPCP PCPELVWRSC LGQHIGAEQM MVCSKVKAFS CQNLCGNLLG CTNHYCTKPC 600 HALKSQTSIA DRSVRTEPCE ECHLPCEKER KLACPHPCPI PCHPGDCSPC KTLIKRSCHC 660 GAMVHVFECT RYNSLPENEQ LTIRSCAGHC HRKLLNCSHL CPEKCHPGQC PSPEKCSKKV 720 NVRCRCQNLK KEWLCQDVQA AYISTGCDPK DISKSQFGIG LLPCNSECAS KVKAVESALQ 780 LRKPKVPESK VTDAEPKVPK RRKRRDQVQE ATQVSRLQKI IATVQWFFIC ILILVAVVAA 840 AYYGYKGLLW LSDWMNEVEE RRPRKRFPNI

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MAATEIQHYP VSDSDNDSDN GKDELRHTDL EETIFKSYLQ LNTENSSSSQ PDLSKIKSFL  60
NSSRSGALSC MICLERIRLT DPTWSCYKEC YAVFHLICIQ SWARQASDLA AARAASRLST  120
EHFPLAGANA ANWNCPKCRV EYSKTLIPSK YLCYCGKTQD PDSDPWILPH SCGEVCERPL  180
KYECGHYCLL LCHPGPCPAC PKLVKNRCFC GKIEDVKRCG FKDFTCNRVC EKKLDCGVHR  240
CNVICHQGLC PPCKAKGVYK CQCGKFEQER ECFEREFKCE NECGKLLGCG KHVCERGCHE  300
GMCGGCPYQG KRSCPCGKRV YEGMPCDTVL PTCGSTCEKM LSCGIHRCPE RCHKGSCNET  360
CRTVIIKSCR CGSLRKQVPC HQALACERKC NRGRDCGRHA CRRRCCDGDC PPCSEICDRK  420
LRCNNHKCPS PCHRGACAPC PLMVTISCSC GETRFEVPCG TEREQKPPKC PKRCSISPLC  480
RHAPKRKPHK CHYGACPPCR LVCEEEYPCG HNCKLRCHGP EPPPNPEFTL KSKKKKSNRK  540
PECTPGTPCP PCPELVWRSC LGQHIGAEQM MVCSKVKAFS CQNLCGNLLG CTNHYCTKPC  600
HALKSQTSIA DRSVRTEPCE ECHLPCEKER KLACPHPCPI PCHPGDCSPC KTLIKRSCHC  660
GAMVHVFECT RYNSLPENEQ LTIRSCAGHC HRKLLNCSHL CPEKCHPGQC PSPEKCSKKV  720
NVRCRCQNLK KEWLCQDVQA AYISTGCDPK DISKSQFGIG LLPCNSECAS KVKAVESALQ  780
LRKPKVPESK VTDAEPKVPK RRKRRDQVQE ATQVSRLQKI IATVQWFFIC ILILVAVVAA  840
AYYGYKGLLW LSDWMNEVEE RRPRKRFPNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	796	802	PKVPKRR
2	797	803	KVPKRRK
3	799	805	PKVPKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein