PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026417873.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 364aa MW: 40800.1 Da PI: 7.5618 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20.2 | 1.1e-06 | 3 | 26 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 k++lC+ffa G C Gd C F+H+ XP_026417873.1 3 KRVLCKFFAH-GACLKGDHCEFSHD 26 99****6666.*************5 PP | |||||||
2 | zf-CCCH | 23 | 1.4e-07 | 34 | 54 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C f+++ G C yG++C++ H+ XP_026417873.1 34 ICTFYQK-GACAYGSKCRYEHV 54 7******.***********997 PP | |||||||
3 | zf-CCCH | 20.1 | 1.1e-06 | 146 | 167 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C+ fa+ G C++G+rC+ +Hg XP_026417873.1 146 PICS-FAAAGKCPRGERCPHIHG 167 5788.**************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MSKRVLCKFF AHGACLKGDH CEFSHDWKDQ TNNICTFYQK GACAYGSKCR YEHVKASRPH 60 TSLSSASTNS HHHIPSSSVP VTCHPSRVPL SSEPSPVLSI HTELSDLSRP FFLPATSPWS 120 QESGENYLLE NENGGESTAV DPAEIPICSF AAAGKCPRGE RCPHIHGDLC PTCERYCLHP 180 YRPDEREEHT MACGRKQKHL AALKHSQEIE CSVCLDRVLS KPSAAERKFG LLSECDHPFC 240 ISCIRNWRNN SPTSGMDVNS ALRACPICRK LSYFVIPSVI WYANQEEKQD IVSSYKAKLS 300 SIDCRHFDFG NATCPFGTSC FYKHAYRDGR LEEVALRHLG AEDGDTVIAK DIRLSDFLRN 360 LQLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08505.1 | 1e-151 | C3H family protein |