PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026417866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 564aa MW: 61482.2 Da PI: 4.9939 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.1 | 2e-18 | 41 | 88 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed +lv++v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_026417866.1 41 KGPWTSQEDAILVEYVNKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 88 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.8e-15 | 94 | 137 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T++E+ +v++++++G++ W++ a++++ gRt++++k++w++ XP_026417866.1 94 KGAFTADEERMIVELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 137 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 564 aa Download sequence |
MSHSSNDSED GLLSKDQSDS QSIDEGSCGG SFGVGGVILK KGPWTSQEDA ILVEYVNKHG 60 EGNWNAVQKH SGLSRCGKSC RLRWANHLRP NLKKGAFTAD EERMIVELHA KMGNKWARMA 120 AHLPGRTDNE IKNYWNTRIK RRQRAGLPLY PPEVCMQTLN GNYQYQESDE FNNVDMQQQG 180 LLHANNYEIP DVTFDGLKGN QGVLSCEHAL PDMSVVMLPQ GLGSSLSYNF YPTTMHRLKR 240 LRDPENLFPG FNSSLASSVV SPFDPFQSES CEKIHQPPFG LTFPCVPNRN KIKKSSPFGA 300 RSGSHAFSNG NFSTSKPING PVKLELPSFQ YPDTDVGGCW GTSPVLPSLE SVDTFTQSSP 360 LSNGQVQSDC LSSRNSGLLD ALLQEAQTLK NQSSEKSSSS SVVTPSDVMD GSNLDLCETG 420 WEDYGDPISP LGRSAASVFG GCTPISGSST DDPALSEALP VAGSSIKQEP VEHITNPYGG 480 EEGTSPKLDF SRPDALLGAG WFDHPSCAKD NSKADTIAAL LGEDLCNDYK HMNETNTITQ 540 EWETVSKEWD NMPDGCHVIQ TSLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G11440.1 | 1e-110 | MYB family protein |