PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417542.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 289aa MW: 32156 Da PI: 4.8494

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	15	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++ Ed +l+ +v+++G ++W++I++ ++ +R++k+c++rw + XP_026417542.1 15 RGSWSQAEDAKLKTLVELHGARNWSLISSGIP-NRSGKSCRLRWCNQ 60 89****************************.*********985 PP
2	Myb_DNA-binding	58	2.2e-18	68	111	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++T+ Ede++++a++ +G++ W+tIar ++ gRt++ +k++w++ XP_026417542.1 68 MPFTPAEDEIILKAHASHGNK-WATIARLLP-GRTDNAIKNHWNST 111 68*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MILEDMSSAG GDRLRGSWSQ AEDAKLKTLV ELHGARNWSL ISSGIPNRSG KSCRLRWCNQ 60 LSPAVQHMPF TPAEDEIILK AHASHGNKWA TIARLLPGRT DNAIKNHWNS TLRKRFVTMT 120 SSTTNESLTS SVVSVSDVVP DESESELVLP DMKRPRFNND DIDEIINGGH RSLEEEPVTS 180 LTLSLPGDSR NLVTVSNAQD GATACKEGED EEVAAVAGGG EGKIRDENDN AKEQNPKFDD 240 KEEGMGMMRS YEVEMKEMCL INIMHRMIVE EVRKYFDTVQ PGFRCQFDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	2e-50	MYB family protein