PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026416538.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 242aa MW: 28349.4 Da PI: 5.7841

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026416538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.5e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l+ v+ +G ++W++Ia+ g++R++k+c++rw +yl XP_026416538.1 15 KGPWVEEEDERLAMFVTIMGDRRWDSIAKASGLKRSGKSCRLRWMNYL 62 79********************************************97 PP
2	Myb_DNA-binding	49.2	1.2e-15	69	113	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g +T eE+ ++++++++G++ W++Iar+++ gRt++++k++w+++l XP_026416538.1 69 GQMTIEEEHMILQLHERWGNK-WSRIARRLP-GRTDNEIKNYWRTHL 113 67899**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MVYRNASMQD DTIRKGPWVE EEDERLAMFV TIMGDRRWDS IAKASGLKRS GKSCRLRWMN 60 YLRPDLKHGQ MTIEEEHMIL QLHERWGNKW SRIARRLPGR TDNEIKNYWR THLRKRAQEQ 120 EQEKVQREIE IAMSSKPEKT MLRQDSDLSS QSTTTYESSN GSGEDNKMTM SEDVFVSSDY 180 PFTMSPYESR LSDWISGSSS NNQTDTFKDQ NVSSVEDSWF RYPAAGETDG IWGNCSATLW 240 NW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	2e-59	MYB family protein