PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415645.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 1679aa MW: 188119 Da PI: 9.3288

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415645.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.3	1.7e-13	43	88	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g WT+eEd+ l + v+ + g++Wk+Ia+ + +Rt+ qc +rwqk+l XP_026415645.1 43 GGWTAEEDDYLRKWVEVYKGKHWKKIASGLH-NRTDVQCLHRWQKVL 88 66***************************.**********986 PP
2	Myb_DNA-binding	50.9	3.5e-16	94	140	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++v + G+ W+ +a+ ++ gR +kqc++rw+++l XP_026415645.1 94 KGPWSQEEDRKLIELVSKSGPIKWSVVAKSIP-GRIGKQCRERWYNHL 140 79****************99******.***********97 PP
3	Myb_DNA-binding	41.2	3.7e-13	146	188	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT++E++ +++a++ +G+ W+ Ia+ ++ gRt++ +k+ w+ XP_026415645.1 146 KDAWTKDEELAILRAHRVYGNQ-WAEIAKFLP-GRTDNAIKNLWN 188 679***************99.*****.*******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1679 aa Download sequence
MAAAKIDVPY RSKNKESIIS EEEEEEAKRI SKTIRGPIRH REGGWTAEED DYLRKWVEVY 60 KGKHWKKIAS GLHNRTDVQC LHRWQKVLNP DVNKGPWSQE EDRKLIELVS KSGPIKWSVV 120 AKSIPGRIGK QCRERWYNHL DPNIKKDAWT KDEELAILRA HRVYGNQWAE IAKFLPGRTD 180 NAIKNLWNCS LKKKLDLYPS DDQLPPVLNA DNAKNIPTSS EKLRYPSIYW EDNLWNTALQ 240 KNLGIHLSTG KLPSFGSVLK TGEDNVKNAT KSSVGNSAVS SNKGLNAIAG SCLVNENSTK 300 NLWITPLLEN LDIHQSTESL QSSGSVLKTG EANPKSATKP TAVGNSTMSD KKGFSAGTRS 360 SLENEKSIVN IRNSSLKTLL DFHRSTGQLP AVGSVLNTRG DDEKKVTTSS VAGNSAVCND 420 KFFNTSTRSC LEFTGQLPPV GTVLNTEDYA LQISISQAAG KISGCSNEGF TDGCMDPVEP 480 SIPESLDAGD PTGVLVTKSS SSVDLGCRQL ASDHEFSRTN SKANLVNDSS IGDTERSIAG 540 TLLSFSVPVT GSLNQETSDL TSEIGKTCVL AADLSNFDVL GCRQLASKHV FSRSNSKANL 600 VKYRSIGDIE RSIAGTLLSI SVPVAGSLNQ ETSGLTSEIG KSGVLATDSS NSVGLGCRQL 660 ASKHEFSRSN SKANLVKYRS IGDIERRIAG TPLPISVPVT KFKNRRATAV KESKPSKKSA 720 LSDAIRSQWE LQRSLQDQRE FPREPQIRAV ETAQQPQKLF EEKKKVGEAF MLANQSSCST 780 NPAVSAVPSS TRLGPDLLNV GSNDVSLRNN LHEGVLELGV TGSLNQETVV LTSDLSPTIC 840 LPPVCNDNLV DQRVESLFKN VAKSFSTLPS ILRKRKREAG GARNQDEHIK EVQGEESLHS 900 FEMQKADNSK EKPGSMVNLE SDNISFRGNN TVRQFYSRKA WKNKSEVFKS LEKHLDGDEH 960 TNEVMDEEGL HSPERKKTDS TEEKPGSVDV NLKSDNSVCG GNSTVRLFYT RNSRPYRFRQ 1020 KQSEVFYTRK VRPYGLKKNK SDVSVSLEKQ LDRHVHTSKL QDEKSLLTVE RKKTDNGEKM 1080 AGSADVNLKS DNSVSRGNST VRLFYTRNAR PYRYRQKQSD MSYTKKARPC GLSKNKSDVS 1140 MSLEKQLHRD EHTDEGQDEE SFHRVERKET DNGEEMAGSP DVSLKNESAA CSGNSTVRLF 1200 YTRKARPYGV KQKQSDMFYT RKARPCGSMQ IKSDVSVSLE KQLDRDEHKN EVQDEESLHT 1260 VERKRTDNGE EMAGSLDVNL KTESSACRGN STVRLFYTKM ARPYGLRKNK SDVFQSLEKQ 1320 LDGDDLTDEV KDEERLYALE RKKLHIREEN PEICRLRQKQ SGMFYTRKAR LYGSMQKNSD 1380 VSVSLQKQLD KDEHRNEVQN EESLHSVERK KSDDSEEMAG SLDVNLNREN SSCPGNSSVR 1440 LFHTKSSPYG SRQNKSDVLK SLENQLDGNE YTNEVVDEEG FDSLRRKKVD TRDETAGSVD 1500 VNPKSDKSAY RGNSTVRLFY TRKARLYGCS IKHSGQLYAR KARPYRFMQE ESDISRSVEM 1560 QLDRVEHSSE GQDRDTTRCR LKRSGMFYTR KARPNSLRQT KYDILKLIEK QLNRDEHANE 1620 LRDEKKLPSF ERRVTDTSEE PGPGDVNLIT DNSAYHAHSS VRLFYTRKSR TCSSSRKTI

Sequence ? help Back to Top

Protein Sequence Length: 1679 aa Download sequence

MAAAKIDVPY RSKNKESIIS EEEEEEAKRI SKTIRGPIRH REGGWTAEED DYLRKWVEVY  60
KGKHWKKIAS GLHNRTDVQC LHRWQKVLNP DVNKGPWSQE EDRKLIELVS KSGPIKWSVV  120
AKSIPGRIGK QCRERWYNHL DPNIKKDAWT KDEELAILRA HRVYGNQWAE IAKFLPGRTD  180
NAIKNLWNCS LKKKLDLYPS DDQLPPVLNA DNAKNIPTSS EKLRYPSIYW EDNLWNTALQ  240
KNLGIHLSTG KLPSFGSVLK TGEDNVKNAT KSSVGNSAVS SNKGLNAIAG SCLVNENSTK  300
NLWITPLLEN LDIHQSTESL QSSGSVLKTG EANPKSATKP TAVGNSTMSD KKGFSAGTRS  360
SLENEKSIVN IRNSSLKTLL DFHRSTGQLP AVGSVLNTRG DDEKKVTTSS VAGNSAVCND  420
KFFNTSTRSC LEFTGQLPPV GTVLNTEDYA LQISISQAAG KISGCSNEGF TDGCMDPVEP  480
SIPESLDAGD PTGVLVTKSS SSVDLGCRQL ASDHEFSRTN SKANLVNDSS IGDTERSIAG  540
TLLSFSVPVT GSLNQETSDL TSEIGKTCVL AADLSNFDVL GCRQLASKHV FSRSNSKANL  600
VKYRSIGDIE RSIAGTLLSI SVPVAGSLNQ ETSGLTSEIG KSGVLATDSS NSVGLGCRQL  660
ASKHEFSRSN SKANLVKYRS IGDIERRIAG TPLPISVPVT KFKNRRATAV KESKPSKKSA  720
LSDAIRSQWE LQRSLQDQRE FPREPQIRAV ETAQQPQKLF EEKKKVGEAF MLANQSSCST  780
NPAVSAVPSS TRLGPDLLNV GSNDVSLRNN LHEGVLELGV TGSLNQETVV LTSDLSPTIC  840
LPPVCNDNLV DQRVESLFKN VAKSFSTLPS ILRKRKREAG GARNQDEHIK EVQGEESLHS  900
FEMQKADNSK EKPGSMVNLE SDNISFRGNN TVRQFYSRKA WKNKSEVFKS LEKHLDGDEH  960
TNEVMDEEGL HSPERKKTDS TEEKPGSVDV NLKSDNSVCG GNSTVRLFYT RNSRPYRFRQ  1020
KQSEVFYTRK VRPYGLKKNK SDVSVSLEKQ LDRHVHTSKL QDEKSLLTVE RKKTDNGEKM  1080
AGSADVNLKS DNSVSRGNST VRLFYTRNAR PYRYRQKQSD MSYTKKARPC GLSKNKSDVS  1140
MSLEKQLHRD EHTDEGQDEE SFHRVERKET DNGEEMAGSP DVSLKNESAA CSGNSTVRLF  1200
YTRKARPYGV KQKQSDMFYT RKARPCGSMQ IKSDVSVSLE KQLDRDEHKN EVQDEESLHT  1260
VERKRTDNGE EMAGSLDVNL KTESSACRGN STVRLFYTKM ARPYGLRKNK SDVFQSLEKQ  1320
LDGDDLTDEV KDEERLYALE RKKLHIREEN PEICRLRQKQ SGMFYTRKAR LYGSMQKNSD  1380
VSVSLQKQLD KDEHRNEVQN EESLHSVERK KSDDSEEMAG SLDVNLNREN SSCPGNSSVR  1440
LFHTKSSPYG SRQNKSDVLK SLENQLDGNE YTNEVVDEEG FDSLRRKKVD TRDETAGSVD  1500
VNPKSDKSAY RGNSTVRLFY TRKARLYGCS IKHSGQLYAR KARPYRFMQE ESDISRSVEM  1560
QLDRVEHSSE GQDRDTTRCR LKRSGMFYTR KARPNSLRQT KYDILKLIEK QLNRDEHANE  1620
LRDEKKLPSF ERRVTDTSEE PGPGDVNLIT DNSAYHAHSS VRLFYTRKSR TCSSSRKTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1032	1040	RPYGLKKNK
2	1302	1310	RPYGLKKNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	2e-81	MYB family protein