PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415644.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 1695aa MW: 189973 Da PI: 9.2509

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.3	1.7e-13	43	88	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g WT+eEd+ l + v+ + g++Wk+Ia+ + +Rt+ qc +rwqk+l XP_026415644.1 43 GGWTAEEDDYLRKWVEVYKGKHWKKIASGLH-NRTDVQCLHRWQKVL 88 66***************************.**********986 PP
2	Myb_DNA-binding	50.9	3.5e-16	94	140	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++v + G+ W+ +a+ ++ gR +kqc++rw+++l XP_026415644.1 94 KGPWSQEEDRKLIELVSKSGPIKWSVVAKSIP-GRIGKQCRERWYNHL 140 79****************99******.***********97 PP
3	Myb_DNA-binding	41.2	3.8e-13	146	188	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT++E++ +++a++ +G+ W+ Ia+ ++ gRt++ +k+ w+ XP_026415644.1 146 KDAWTKDEELAILRAHRVYGNQ-WAEIAKFLP-GRTDNAIKNLWN 188 679***************99.*****.*******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1695 aa Download sequence
MAAAKIDVPY RSKNKESIIS EEEEEEAKRI SKTIRGPIRH REGGWTAEED DYLRKWVEVY 60 KGKHWKKIAS GLHNRTDVQC LHRWQKVLNP DVNKGPWSQE EDRKLIELVS KSGPIKWSVV 120 AKSIPGRIGK QCRERWYNHL DPNIKKDAWT KDEELAILRA HRVYGNQWAE IAKFLPGRTD 180 NAIKNLWNCS LKKKLDLYPS DDQLPPVLNA DNAKNIPTSS EKLRYPSIYW EDNLWNTALQ 240 KNLGIHLSTG KLPSFGSVLK TGEDNVKNAT KSSVGNSAVS SNKGLNAIAG SCLVNENSTK 300 NLWITPLLEN LDIHQSTESL QSSGSVLKTG EANPKSATKP TAVGNSTMSD KKGFSAGTRS 360 SLENEKSIVN IRNSSLKTLL DFHRSTGQLP AVGSVLNTRG DDEKKVTTSS VAGNSAVCND 420 KFFNTSTRSC LEFTGQLPPV GTVLNTEDYA LQISISQAAG KISGCSNEGF TDGTQRSLGN 480 EEFYKVDEGC MDPVEPSIPE SLDAGDPTGV LVTKSSSSVD LGCRQLASDH EFSRTNSKAN 540 LVNDSSIGDT ERSIAGTLLS FSVPVTGSLN QETSDLTSEI GKTCVLAADL SNFDVLGCRQ 600 LASKHVFSRS NSKANLVKYR SIGDIERSIA GTLLSISVPV AGSLNQETSG LTSEIGKSGV 660 LATDSSNSVG LGCRQLASKH EFSRSNSKAN LVKYRSIGDI ERRIAGTPLP ISVPVTKFKN 720 RRATAVKESK PSKKSALSDA IRSQWELQRS LQDQREFPRE PQIRAVETAQ QPQKLFEEKK 780 KVGEAFMLAN QSSCSTNPAV SAVPSSTRLG PDLLNVGSND VSLRNNLHEG VLELGVTGSL 840 NQETVVLTSD LSPTICLPPV CNDNLVDQRV ESLFKNVAKS FSTLPSILRK RKREAGGARN 900 QDEHIKEVQG EESLHSFEMQ KADNSKEKPG SMVNLESDNI SFRGNNTVRQ FYSRKAWKNK 960 SEVFKSLEKH LDGDEHTNEV MDEEGLHSPE RKKTDSTEEK PGSVDVNLKS DNSVCGGNST 1020 VRLFYTRNSR PYRFRQKQSE VFYTRKVRPY GLKKNKSDVS VSLEKQLDRH VHTSKLQDEK 1080 SLLTVERKKT DNGEKMAGSA DVNLKSDNSV SRGNSTVRLF YTRNARPYRY RQKQSDMSYT 1140 KKARPCGLSK NKSDVSMSLE KQLHRDEHTD EGQDEESFHR VERKETDNGE EMAGSPDVSL 1200 KNESAACSGN STVRLFYTRK ARPYGVKQKQ SDMFYTRKAR PCGSMQIKSD VSVSLEKQLD 1260 RDEHKNEVQD EESLHTVERK RTDNGEEMAG SLDVNLKTES SACRGNSTVR LFYTKMARPY 1320 GLRKNKSDVF QSLEKQLDGD DLTDEVKDEE RLYALERKKL HIREENPEIC RLRQKQSGMF 1380 YTRKARLYGS MQKNSDVSVS LQKQLDKDEH RNEVQNEESL HSVERKKSDD SEEMAGSLDV 1440 NLNRENSSCP GNSSVRLFHT KSSPYGSRQN KSDVLKSLEN QLDGNEYTNE VVDEEGFDSL 1500 RRKKVDTRDE TAGSVDVNPK SDKSAYRGNS TVRLFYTRKA RLYGCSIKHS GQLYARKARP 1560 YRFMQEESDI SRSVEMQLDR VEHSSEGQDR DTTRCRLKRS GMFYTRKARP NSLRQTKYDI 1620 LKLIEKQLNR DEHANELRDE KKLPSFERRV TDTSEEPGPG DVNLITDNSA YHAHSSVRLF 1680 YTRKSRTCSS SRKTI

Sequence ? help Back to Top

Protein Sequence Length: 1695 aa Download sequence

MAAAKIDVPY RSKNKESIIS EEEEEEAKRI SKTIRGPIRH REGGWTAEED DYLRKWVEVY  60
KGKHWKKIAS GLHNRTDVQC LHRWQKVLNP DVNKGPWSQE EDRKLIELVS KSGPIKWSVV  120
AKSIPGRIGK QCRERWYNHL DPNIKKDAWT KDEELAILRA HRVYGNQWAE IAKFLPGRTD  180
NAIKNLWNCS LKKKLDLYPS DDQLPPVLNA DNAKNIPTSS EKLRYPSIYW EDNLWNTALQ  240
KNLGIHLSTG KLPSFGSVLK TGEDNVKNAT KSSVGNSAVS SNKGLNAIAG SCLVNENSTK  300
NLWITPLLEN LDIHQSTESL QSSGSVLKTG EANPKSATKP TAVGNSTMSD KKGFSAGTRS  360
SLENEKSIVN IRNSSLKTLL DFHRSTGQLP AVGSVLNTRG DDEKKVTTSS VAGNSAVCND  420
KFFNTSTRSC LEFTGQLPPV GTVLNTEDYA LQISISQAAG KISGCSNEGF TDGTQRSLGN  480
EEFYKVDEGC MDPVEPSIPE SLDAGDPTGV LVTKSSSSVD LGCRQLASDH EFSRTNSKAN  540
LVNDSSIGDT ERSIAGTLLS FSVPVTGSLN QETSDLTSEI GKTCVLAADL SNFDVLGCRQ  600
LASKHVFSRS NSKANLVKYR SIGDIERSIA GTLLSISVPV AGSLNQETSG LTSEIGKSGV  660
LATDSSNSVG LGCRQLASKH EFSRSNSKAN LVKYRSIGDI ERRIAGTPLP ISVPVTKFKN  720
RRATAVKESK PSKKSALSDA IRSQWELQRS LQDQREFPRE PQIRAVETAQ QPQKLFEEKK  780
KVGEAFMLAN QSSCSTNPAV SAVPSSTRLG PDLLNVGSND VSLRNNLHEG VLELGVTGSL  840
NQETVVLTSD LSPTICLPPV CNDNLVDQRV ESLFKNVAKS FSTLPSILRK RKREAGGARN  900
QDEHIKEVQG EESLHSFEMQ KADNSKEKPG SMVNLESDNI SFRGNNTVRQ FYSRKAWKNK  960
SEVFKSLEKH LDGDEHTNEV MDEEGLHSPE RKKTDSTEEK PGSVDVNLKS DNSVCGGNST  1020
VRLFYTRNSR PYRFRQKQSE VFYTRKVRPY GLKKNKSDVS VSLEKQLDRH VHTSKLQDEK  1080
SLLTVERKKT DNGEKMAGSA DVNLKSDNSV SRGNSTVRLF YTRNARPYRY RQKQSDMSYT  1140
KKARPCGLSK NKSDVSMSLE KQLHRDEHTD EGQDEESFHR VERKETDNGE EMAGSPDVSL  1200
KNESAACSGN STVRLFYTRK ARPYGVKQKQ SDMFYTRKAR PCGSMQIKSD VSVSLEKQLD  1260
RDEHKNEVQD EESLHTVERK RTDNGEEMAG SLDVNLKTES SACRGNSTVR LFYTKMARPY  1320
GLRKNKSDVF QSLEKQLDGD DLTDEVKDEE RLYALERKKL HIREENPEIC RLRQKQSGMF  1380
YTRKARLYGS MQKNSDVSVS LQKQLDKDEH RNEVQNEESL HSVERKKSDD SEEMAGSLDV  1440
NLNRENSSCP GNSSVRLFHT KSSPYGSRQN KSDVLKSLEN QLDGNEYTNE VVDEEGFDSL  1500
RRKKVDTRDE TAGSVDVNPK SDKSAYRGNS TVRLFYTRKA RLYGCSIKHS GQLYARKARP  1560
YRFMQEESDI SRSVEMQLDR VEHSSEGQDR DTTRCRLKRS GMFYTRKARP NSLRQTKYDI  1620
LKLIEKQLNR DEHANELRDE KKLPSFERRV TDTSEEPGPG DVNLITDNSA YHAHSSVRLF  1680
YTRKSRTCSS SRKTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1048	1056	RPYGLKKNK
2	1318	1326	RPYGLKKNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	2e-81	MYB family protein