PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026415489.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 425aa    MW: 47846.9 Da    PI: 9.7535
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026415489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.84.2e-18146238199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v +  +l lp kf+e++  k + +++++lede+g ++e  +i    +  + +++GW+ F+ +++L++gD vvF+  +++ ++++v 
  XP_026415489.1 146 FVKSMLRSHVYSCFWLGLPTKFCESYLPKDQLKVDVVLEDEEGLEYEAVYI--PER--TGISGGWRAFALDHKLDDGDAVVFE--RTEAARFKVY 234
                     89************************55556889****************4..433..4499*********************..4477777999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f++
  XP_026415489.1 235 IFKA 238
                     9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MAKGTCDNNF YEEARKQRLE ENKKRFEDLG IPKITKTLSE VTKMGQESPV KRQVKPRSRT  60
APTSPDSLRR SSRPRSTAVS YEEEYTDHSL LTKRSRSRVR SSSASSSSYI ARPLDEIKVA  120
TRKERCAALK RAESFESNLQ SKHPSFVKSM LRSHVYSCFW LGLPTKFCES YLPKDQLKVD  180
VVLEDEEGLE YEAVYIPERT GISGGWRAFA LDHKLDDGDA VVFERTEAAR FKVYIFKASN  240
CAGKVNAKEM KRVTESKTLK LQKVKKSDEN DEDADYNMSE GRDVLEAKAR GKKARKSEKV  300
IKTDTDNCAS EEELMELTGD GGRKTRSSKK LRMSGANADM GEEDLVQISK QQRTTRNSKK  360
TEDCDISGVT KIENSVKPAE PAKEIDGSVS RRLQLGRHSK RVAKTGAEEG SKTTKLVDVA  420
FSGYE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19398KRSRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.13e-49B3 family protein