PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415445.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 1858aa MW: 205093 Da PI: 6.32

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415445.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.6	6.7e-09	911	953	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT+eE e +++ + +G++ +++Ia+++ ++t +c+++++k XP_026415445.1 911 NPWTPEEKEVFLEKLAAFGKD-FNRIASYLT-HKTTADCVEFYYK 953 58***************99.****9.*********98 PP
2	Myb_DNA-binding	24.6	6.1e-08	1133	1173	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE + +++a++ + ++ +++I++++ ++++ qc+ ++ XP_026415445.1 1133 DWTDEEKLVFIRAFRSYNKN-FSKISKCVR-TKSRDQCRIFFS 1173 6**************988.*****.******8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1858 aa Download sequence
MPPEPSTWDR KDFFKEKKYD RLDSVNSRWR GGGGDPYLGG VGGHRGGDFT RWGGGNEDFR 60 RPLAHGKQGG YQIFPEESGY GCTPSRSSER MVEDESSFRS FSSRGGESKY GRSSREVRGS 120 IIHGSPREWR GHPRESGVDV SFNPFGRHHD LTTQRSVSDI MTSHHHSDAE NTLLDPHPFR 180 DEHDKMGGLD ALGTGHRYER DHSLGGSIPW KRSKWNRSSS LSSRGSGFSH SSSSRSIRTD 240 SDEGKTELHP GRVTPLRSPS VETSGDLPTS LNDETCPRKK PRLGWGQGLA KYEKQKVEVP 300 ERKPAENPVQ QPVEKLVEKS VEKPAEKFVE KFVEKFVEKP VEKLVENSVE EPVEKTDEKP 360 VEKEFNEVRR STGTQSEQEL VLEDASSLKD LPKELPDENP VEKSAEKPDE NAKSGEKPDE 420 NANSKKPTPT IVITSSDTSP RLTGLSECSS PPTPSSFACS SSQGPEDKHL LSCERNDNQT 480 SSSRGSPSCG FLNFVEGFSV NLQHLELTLP LNLNSLLSDL TQPEDVNSGD SNYLRSTAMN 540 KLLLLKSEFL KAVEKTEGEI DKFENELKQL NSEPDTVSVS PDTTDAVQLN SGLKSFEVVG 600 ADSKVLLKPA PLQVVSSDDL HSEKTLCDDI MRESHAEVED EIDSPGSATS KFVEHSTGKA 660 DLIALVEELS CRSPEKNNLP STEKKSKDEL CIGDTKSVNE MSTFCDASSE LVGHNYDHEQ 720 LVEAILAANK DSARNACEVF TNLLPADGPE LEKREVNLDS CPQNNVILKE KVRARMRLQR 780 FKERALTLKY RALQHMWKED MLLLSVRKCK LKSQKRVESS LKFLHNGQQK HRSSIRSRFT 840 SPGNSTLVPT ANIVDFTSKL LSDSRVKVHR SSLKMPALIL DEKQRKSSMF VSNNGLVEDP 900 LSVEKERLMV NPWTPEEKEV FLEKLAAFGK DFNRIASYLT HKTTADCVEF YYKNHKSESF 960 EKIRKKMDSR KQVGNLPNTY LMTSGQKWNR EANAVSLDVL GATSMKASHA DDSEKTQQSS 1020 VGRPFLLRHC EYKASSSSDF AAVSKSSTSD MLGNEREVVA ADVLAGICGA LSSEAVSSCI 1080 TSSIDHVEGC QDWKFRRRNL VADDCSLTPE VMQKIDCQEA CSDESCGEFD SVDWTDEEKL 1140 VFIRAFRSYN KNFSKISKCV RTKSRDQCRI FFSKARKSLG LDLIQPGSDN AGTLLSDDNG 1200 GRSDTEDACG MEIESAICST QSCTKMDVDL PLSVANTDDK ALERDKTTHT LAEHHKLCDT 1260 EQSDYGDSDP RREVPDDFQA MVTPEGKVMA TEKIVQCNGV VKEATISCEF PVQAHEGASF 1320 TAETETETVK ELGVSQPVSL HDDTACGGAP AEQLKVIPVV SAEITAESSI KLHNGGRDGQ 1380 YVKDAGVDIK SNRSSAYSSV PESKINGILT PGICPTPNYH SENSRDLISS GQAPPVMFWQ 1440 QKENFPSISA NLCPRDSASA HCEGHLGKST PSSTLNFENR KRQRSENVDA YQPQLLGNGT 1500 LNQVESSQIL RGYPLKVLNK KEINGAAESN QILHGLYHDT GDALKAPRLL SEMPLLVRGG 1560 HEQRSRSRSR SSSDTEEHSR RNGDVKLFGQ ILSHPSPVPL SSPLTTNQLT DSKIETPKLS 1620 SSKSSSNLKL INDHANEGVP SPLKHDAAGN HYGASEYPMQ SYGFWDGNKI QMGLPSIPPD 1680 SAILFSKYPT VAFSDFSTTS SCIDKQQQTM LKSKDRNLGC VSVYPTKDVV SSASNHHNNS 1740 SSSNNNSSSR GLADYHKVYR SHDGSKDVMK QRNDMFPQLQ KPNGCENLQQ QQIQGRGVVG 1800 MLNVMGGGGI LVRGVSDPVA AIKMHYAAST AERYGGQVGS VMMMREEDPC WRGGDIGR

Sequence ? help Back to Top

Protein Sequence Length: 1858 aa Download sequence

MPPEPSTWDR KDFFKEKKYD RLDSVNSRWR GGGGDPYLGG VGGHRGGDFT RWGGGNEDFR  60
RPLAHGKQGG YQIFPEESGY GCTPSRSSER MVEDESSFRS FSSRGGESKY GRSSREVRGS  120
IIHGSPREWR GHPRESGVDV SFNPFGRHHD LTTQRSVSDI MTSHHHSDAE NTLLDPHPFR  180
DEHDKMGGLD ALGTGHRYER DHSLGGSIPW KRSKWNRSSS LSSRGSGFSH SSSSRSIRTD  240
SDEGKTELHP GRVTPLRSPS VETSGDLPTS LNDETCPRKK PRLGWGQGLA KYEKQKVEVP  300
ERKPAENPVQ QPVEKLVEKS VEKPAEKFVE KFVEKFVEKP VEKLVENSVE EPVEKTDEKP  360
VEKEFNEVRR STGTQSEQEL VLEDASSLKD LPKELPDENP VEKSAEKPDE NAKSGEKPDE  420
NANSKKPTPT IVITSSDTSP RLTGLSECSS PPTPSSFACS SSQGPEDKHL LSCERNDNQT  480
SSSRGSPSCG FLNFVEGFSV NLQHLELTLP LNLNSLLSDL TQPEDVNSGD SNYLRSTAMN  540
KLLLLKSEFL KAVEKTEGEI DKFENELKQL NSEPDTVSVS PDTTDAVQLN SGLKSFEVVG  600
ADSKVLLKPA PLQVVSSDDL HSEKTLCDDI MRESHAEVED EIDSPGSATS KFVEHSTGKA  660
DLIALVEELS CRSPEKNNLP STEKKSKDEL CIGDTKSVNE MSTFCDASSE LVGHNYDHEQ  720
LVEAILAANK DSARNACEVF TNLLPADGPE LEKREVNLDS CPQNNVILKE KVRARMRLQR  780
FKERALTLKY RALQHMWKED MLLLSVRKCK LKSQKRVESS LKFLHNGQQK HRSSIRSRFT  840
SPGNSTLVPT ANIVDFTSKL LSDSRVKVHR SSLKMPALIL DEKQRKSSMF VSNNGLVEDP  900
LSVEKERLMV NPWTPEEKEV FLEKLAAFGK DFNRIASYLT HKTTADCVEF YYKNHKSESF  960
EKIRKKMDSR KQVGNLPNTY LMTSGQKWNR EANAVSLDVL GATSMKASHA DDSEKTQQSS  1020
VGRPFLLRHC EYKASSSSDF AAVSKSSTSD MLGNEREVVA ADVLAGICGA LSSEAVSSCI  1080
TSSIDHVEGC QDWKFRRRNL VADDCSLTPE VMQKIDCQEA CSDESCGEFD SVDWTDEEKL  1140
VFIRAFRSYN KNFSKISKCV RTKSRDQCRI FFSKARKSLG LDLIQPGSDN AGTLLSDDNG  1200
GRSDTEDACG MEIESAICST QSCTKMDVDL PLSVANTDDK ALERDKTTHT LAEHHKLCDT  1260
EQSDYGDSDP RREVPDDFQA MVTPEGKVMA TEKIVQCNGV VKEATISCEF PVQAHEGASF  1320
TAETETETVK ELGVSQPVSL HDDTACGGAP AEQLKVIPVV SAEITAESSI KLHNGGRDGQ  1380
YVKDAGVDIK SNRSSAYSSV PESKINGILT PGICPTPNYH SENSRDLISS GQAPPVMFWQ  1440
QKENFPSISA NLCPRDSASA HCEGHLGKST PSSTLNFENR KRQRSENVDA YQPQLLGNGT  1500
LNQVESSQIL RGYPLKVLNK KEINGAAESN QILHGLYHDT GDALKAPRLL SEMPLLVRGG  1560
HEQRSRSRSR SSSDTEEHSR RNGDVKLFGQ ILSHPSPVPL SSPLTTNQLT DSKIETPKLS  1620
SSKSSSNLKL INDHANEGVP SPLKHDAAGN HYGASEYPMQ SYGFWDGNKI QMGLPSIPPD  1680
SAILFSKYPT VAFSDFSTTS SCIDKQQQTM LKSKDRNLGC VSVYPTKDVV SSASNHHNNS  1740
SSSNNNSSSR GLADYHKVYR SHDGSKDVMK QRNDMFPQLQ KPNGCENLQQ QQIQGRGVVG  1800
MLNVMGGGGI LVRGVSDPVA AIKMHYAAST AERYGGQVGS VMMMREEDPC WRGGDIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-110	MYB family protein