PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414486.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 309aa MW: 35067.1 Da PI: 9.7106

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.3	1.3e-11	39	83	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 rWT+eE +++ +a +q+ ++ +W +Ia +++ g+t +++ + XP_026414486.1 39 RWTQEENKRFENALAQYDKDtpdRWQKIALMIP-GKTVNDVMKQYK 83 9******************************.****998775 PP
2	Myb_DNA-binding	39.9	9.5e-13	141	185	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + k++G+g+W+ I+r + Rt+ q+ s+ qky XP_026414486.1 141 PWTEDEHRLFLLGLKKYGKGDWRNISRNFVISRTPTQVASHAQKY 185 8***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MMKWGMEILS PQSYLPVSNW LLEENNNSNN NHSNNKSTRW TQEENKRFEN ALAQYDKDTP 60 DRWQKIALMI PGKTVNDVMK QYKLLEDDVG YIEAGLVPIP GYTTSSFTLD WVNSRSFDGS 120 NGGKRSSSTR PGDQERKKGV PWTEDEHRLF LLGLKKYGKG DWRNISRNFV ISRTPTQVAS 180 HAQKYFIRQL SGGKDKRRSS IHDITTVNLA DNKPPSPDSN TSTIDQSTML TQQPNQNSAP 240 KALFDWNQPH DMVFNPAHGS LYVPPTYGIN SFGMKMQGHN LNRNSLHGSH MGAHNAMFQM 300 QSSQCHPHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	3e-92	MYB family protein