PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414348.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 663aa MW: 75310.4 Da PI: 8.6518

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.8	5.7e-09	474	515	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++W++eE ell ++++++ +g +W+ I++++g+gR+ +++ XP_026414348.1 474 KPWSKEEIELLRKGIQKYQKGtsrRWEVISEYIGTGRSVEEI 515 69***********************************99876 PP
2	Myb_DNA-binding	22.9	2e-07	607	652	2	45
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 ++W++ + lv+a k ++++ +W+++++ ++ g++ qck ++ XP_026414348.1 607 DAWSAVQERALVQALKIFPKEtnqRWERVSAAVP-GKSVLQCKKKFA 652 58******************************.******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MVTQLKHRFI CYSKELVDGQ PIYVSSNALP GKLNREPAGH SFHSAALLLL GFGNKEEEEV 60 QDDDQNASGD KGESYFASSE SYSSKGKKKS GSGKDQHDHY ALLGLGHLRF LATEEQIRKS 120 YRETALKHHP DKQASLLLAE ETEAAKEAKK DDIENHFKAI QEAYEILMDP VRRRLYDSTD 180 EFDDEVPTDC SPQDFFKVFG PAFMRNGRWS VIQPVPSLGE DNSPLKEVDT FYDFWYSFKS 240 WREFPHADEF DLEQAETRDH KRWMERQNSK LREKARKEEH ARVRSLIDNA YKKDPRIARR 300 KEEEKAEKQR RKEAKYLAKK LQEEEAAKAA EEERLRKEEE DKQAAKDALN QKKIKEKEKK 360 LLRKERARLR TVSALVVSEQ SSGVTEDDVE SLCMSFDIDR LRRLCSDLEQ KSGGGDRNRV 420 LKEALGRSND DCNDMKNDGK KNQMPNGSHE VNVSGPSVQA KVENPLQSYE KKEKPWSKEE 480 IELLRKGIQK YQKGTSRRWE VISEYIGTGR SVEEILKATK TVLLQKPDSA KAFDSFLEKR 540 KPAPSIASPL STRQETDGIV SNPSNGPEAN GTKIVSPEKS SGSSNGGQQS ADAAVISSGV 600 SLAVDPDAWS AVQERALVQA LKIFPKETNQ RWERVSAAVP GKSVLQCKKK FAMMKENFRN 660 KKS

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MVTQLKHRFI CYSKELVDGQ PIYVSSNALP GKLNREPAGH SFHSAALLLL GFGNKEEEEV  60
QDDDQNASGD KGESYFASSE SYSSKGKKKS GSGKDQHDHY ALLGLGHLRF LATEEQIRKS  120
YRETALKHHP DKQASLLLAE ETEAAKEAKK DDIENHFKAI QEAYEILMDP VRRRLYDSTD  180
EFDDEVPTDC SPQDFFKVFG PAFMRNGRWS VIQPVPSLGE DNSPLKEVDT FYDFWYSFKS  240
WREFPHADEF DLEQAETRDH KRWMERQNSK LREKARKEEH ARVRSLIDNA YKKDPRIARR  300
KEEEKAEKQR RKEAKYLAKK LQEEEAAKAA EEERLRKEEE DKQAAKDALN QKKIKEKEKK  360
LLRKERARLR TVSALVVSEQ SSGVTEDDVE SLCMSFDIDR LRRLCSDLEQ KSGGGDRNRV  420
LKEALGRSND DCNDMKNDGK KNQMPNGSHE VNVSGPSVQA KVENPLQSYE KKEKPWSKEE  480
IELLRKGIQK YQKGTSRRWE VISEYIGTGR SVEEILKATK TVLLQKPDSA KAFDSFLEKR  540
KPAPSIASPL STRQETDGIV SNPSNGPEAN GTKIVSPEKS SGSSNGGQQS ADAAVISSGV  600
SLAVDPDAWS AVQERALVQA LKIFPKETNQ RWERVSAAVP GKSVLQCKKK FAMMKENFRN  660
KKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein