PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414119.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 275aa    MW: 30512.4 Da    PI: 4.7652
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414119.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF22.41.6e-076351241
                    HHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
          SRF-TF 12 tfskRrngilKKAeELSvLCdaevaviifs 41
                    +++ R +g+ KK  E S+L d+++++i+++
  XP_026414119.1  6 SYATRIKGLQKKIREFSTLVDVDACMIVYG 35
                    7999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDTLKSYATR IKGLQKKIRE FSTLVDVDAC MIVYGGPSRG GGNHRPVRPD TYPENLGDVI  60
RIVQRYLSLP KQKRTERHKQ LSEDDGKSTI EDDNLNESVS MEDDTVDGLE WDDRFDKLSA  120
DQIQQLIDSV EPKIGTIDEK IQSIEGAERH RSDITAKVPE LGATATIPTG GNTFMQMQPI  180
YVLQPFNQNL VNNGSAMLPM GMINGSVAAN GAYPMVMQYP MMVVRPSGDS NQEDYGNHQG  240
QVAYFMPQAF AQPMTTTTYI PNLMPGGTPS NAKQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.14e-10M-type_MADS family protein