PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026414108.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 494aa MW: 53611.9 Da PI: 8.2079 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 28.1 | 3.6e-09 | 90 | 114 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ++ C++++ t tC++ d+CkF H+ XP_026414108.1 90 GETDCSHYMLTRTCRFADTCKFDHP 114 6789********************8 PP | |||||||
2 | zf-CCCH | 26 | 1.7e-08 | 141 | 167 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++++ C++f++t C++G +CkF+H++ XP_026414108.1 141 PGEPACPYFLKTKKCRFGFKCKFNHPK 167 57899********************96 PP | |||||||
3 | zf-CCCH | 34.5 | 3.5e-11 | 187 | 210 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C f+ +tG+Ck+G++CkF+H++ XP_026414108.1 187 PPCAFYVKTGICKFGESCKFHHPK 210 89********************96 PP | |||||||
4 | zf-CCCH | 38.5 | 2e-12 | 261 | 287 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++++ C+f+++tG CkyG++C+++H++ XP_026414108.1 261 PGEVDCPFYLKTGSCKYGATCRYSHPE 287 57899********************96 PP | |||||||
5 | zf-CCCH | 36.6 | 7.6e-12 | 347 | 371 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ++ +C f+++tG Ck+G+rCk++H+ XP_026414108.1 347 GQTECAFYMKTGDCKFGERCKYHHP 371 6789********************8 PP | |||||||
6 | zf-CCCH | 41.5 | 2.3e-13 | 400 | 423 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 + C+f+++tG CkyG++C+F H+p XP_026414108.1 400 VVCPFYMKTGACKYGSSCRFDHPP 423 67********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 494 aa Download sequence |
MHMMNHHDRY RFPSISQQSL WPPGVDASSS FSRCFAGTKR TSSEALYHQT YLGTSNTFGQ 60 SEAFYSANNL SKRPRFESTS HLPIYPQRPG ETDCSHYMLT RTCRFADTCK FDHPIWVPEG 120 GIPNWKEVPL VPLGDTLPER PGEPACPYFL KTKKCRFGFK CKFNHPKDIA KSVIVDLSLL 180 PERPYAPPCA FYVKTGICKF GESCKFHHPK DIQIPVTGQE NGCAEHDASV GSFDRIMSVK 240 PPFVPFTPAS LHNTKGLPVR PGEVDCPFYL KTGSCKYGAT CRYSHPERAV INISVAPGLG 300 QAMMTSSASS MNVGLINPAA LVLPTIDPRL GQAALGLGVA VYPQRPGQTE CAFYMKTGDC 360 KFGERCKYHH PIDRTAATQP MPKQDVKLTL AGLPRREGAV VCPFYMKTGA CKYGSSCRFD 420 HPPPGEAVAM ATVVQGSSSA PPSGEAIAMP TVTQGSSDAA EGGEGNNNNN NNNNEGGGDH 480 TIVPEAAISF GSTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12680.1 | 0.0 | C3H family protein |