PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026413680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 233aa MW: 27137.2 Da PI: 7.045 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.1 | 2.7e-10 | 23 | 71 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 +WT + d+l+ +a+ +++ + +W +Ia++++ g+t+ ++ ++q +l XP_026413680.1 23 SWTRQQDKLFEQAIVMFPDEndphRWQKIANCVP-GKTASEVYQHYQVLL 71 5*****************99**************.************986 PP | |||||||
2 | Myb_DNA-binding | 45.6 | 1.7e-14 | 129 | 173 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + +++G+g+W++I+r ++Rt+ q+ s+ qky XP_026413680.1 129 PWTEEEHRAFLYGLEKFGKGDWRSISRNAVQTRTPTQVASHAQKY 173 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MFQENISMNI YNNQFQSQSP SYSWTRQQDK LFEQAIVMFP DENDPHRWQK IANCVPGKTA 60 SEVYQHYQVL LADIKDIEEG RVELPSYYDD DVDDNKVVWE TESSPPLPGT MNNNNKTKQT 120 ESERKKGVPW TEEEHRAFLY GLEKFGKGDW RSISRNAVQT RTPTQVASHA QKYFLRLNAE 180 KKERKRSSIH DITTVEKASK VSIKPSDCPV QQMRTMDNLI GSYPRQGDYF GCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 2e-61 | MYB family protein |