PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413649.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 414aa MW: 46578.8 Da PI: 6.5112

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.1e-15	134	179	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ XP_026413649.1 134 RGHWRPAEDFKLKELVCQYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 179 899***************************.*********996 PP
2	Myb_DNA-binding	53.4	5.9e-17	186	229	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e l+ a+k++G++ W+ Iar ++ gRt++ +k++w+ XP_026413649.1 186 RRAFSEEEEETLLTAHKLYGNK-WAMIARLFP-GRTDNAVKNHWHV 229 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGLQQLHSSV NIMPTKNDSS GGSYKGFSGV NNFLPPPPLS PCFGVLDSPK KRLCVKSEMG 60 FQNLSHPLEK QERRWNFQIS EGTRMDEGFS GGDDEKNVMM MKGSTGEMEE DDMFIAEQYN 120 ETGSQSVNNK LCARGHWRPA EDFKLKELVC QYGPQNWNLI AEKLEGRSGK SCRLRWFNQL 180 DPRINRRAFS EEEEETLLTA HKLYGNKWAM IARLFPGRTD NAVKNHWHVI MARKHREQSS 240 VYRKRKPTSA SSHKRTVKTI DHENNNACSE STSTTMDESA STCTNLSLNS SSSRVHPSSV 300 LFTRFSPQQN QLFDEQFQMG SSSEEKMVSF SNEQKHDGCS FYEPGHQQQP VVVMMVMGEG 360 GGDQTGYSES NSDVSVSESV VNNKKNLYND RDCDDNGGEK IAPPFIDFLG VGAT

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGLQQLHSSV NIMPTKNDSS GGSYKGFSGV NNFLPPPPLS PCFGVLDSPK KRLCVKSEMG  60
FQNLSHPLEK QERRWNFQIS EGTRMDEGFS GGDDEKNVMM MKGSTGEMEE DDMFIAEQYN  120
ETGSQSVNNK LCARGHWRPA EDFKLKELVC QYGPQNWNLI AEKLEGRSGK SCRLRWFNQL  180
DPRINRRAFS EEEEETLLTA HKLYGNKWAM IARLFPGRTD NAVKNHWHVI MARKHREQSS  240
VYRKRKPTSA SSHKRTVKTI DHENNNACSE STSTTMDESA STCTNLSLNS SSSRVHPSSV  300
LFTRFSPQQN QLFDEQFQMG SSSEEKMVSF SNEQKHDGCS FYEPGHQQQP VVVMMVMGEG  360
GGDQTGYSES NSDVSVSESV VNNKKNLYND RDCDDNGGEK IAPPFIDFLG VGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-70	MYB family protein