PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413346.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 278aa    MW: 31807.9 Da    PI: 6.5178
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.11.3e-22100190190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     ++Y +YA++ GF++r++++++s+ ++ ++  ++vCskeg+r ++   ++++   ++++r gCka l++  ++  +kw+vt+++ eHnH+l+
  XP_026413346.1 100 DYYGAYARRNGFTIRVNRKRRSRIDEAVIGFDYVCSKEGFRPKRCLGEDRTILLSKQSRAGCKAILVIAYRReIKKWVVTNFVREHNHDLM 190
                     59******************************************9998889999***************99989**************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGDLMYGRMT DILRLGEAAA NSQWVVQLTK TKSMTESTSH LGDLIGSNMV LDGETFDDFE  60
IEDCDTTSRQ DNQLVELTVD VGPSEPCIGM EFNSADDGKD YYGAYARRNG FTIRVNRKRR  120
SRIDEAVIGF DYVCSKEGFR PKRCLGEDRT ILLSKQSRAG CKAILVIAYR REIKKWVVTN  180
FVREHNHDLM GPAEVLVRRS SVKASTEDAK DKRIRELTSE LYNERQRFQR RCSAYEERCA  240
AYKVNFGKIL KDIELHSEHL SVSVSNILQT IKEVDDEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-35FAR1 family protein