PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026413275.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 28591.8 Da PI: 5.8828 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.3 | 3.1e-17 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l+ v+++G ++W++Ia+ g++R++k+c++rw +yl XP_026413275.1 17 KGPWLEEEDERLATFVTLMGERRWDSIAKVSGLRRSGKSCRLRWMNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1.1e-15 | 72 | 115 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +eE+ +++++ +++G++ W++Iar+++ gRt++++k++w+++l XP_026413275.1 72 QMNAEEERIILQLQHRWGNK-WSKIARKLP-GRTDNEIKNYWRTHL 115 6789****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MERVYQSVVV QEDIIRKGPW LEEEDERLAT FVTLMGERRW DSIAKVSGLR RSGKSCRLRW 60 MNYLRPDLKH GQMNAEEERI ILQLQHRWGN KWSKIARKLP GRTDNEIKNY WRTHLRKKTQ 120 TEEQEKDKAA KDALEPDFLS QTDVDHNENR TGIEHEVYAQ EDIMRPSEHS FDVSGLSPRN 180 VLAYSPYENH ILDWISSSES ATLTDNNVLK HNGQCGISSS DSWFNIAADS ILDFTSISLW 240 ESDKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 6e-61 | MYB family protein |