PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413115.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 368aa MW: 41275.9 Da PI: 5.2419

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.9	8.7e-14	1	86	5	98
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ps v+ ++ lp kf+++ ++k ++++ tl de+g++++ ++ ++ ++GW++F ka++L egD +vF+l++ s f +v ++r XP_026413115.1 1 MVPSQVSGGFWMGLPAKFCSSS-LPK-SDTKFTLVDEDGEEYTANY--LPQK--LGSSGGWRGFSKAHKLVEGDALVFHLVDVSIF--KVYIVR 86 6899999**********766.443.6679***********..4444..44689*******************988888..777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MVPSQVSGGF WMGLPAKFCS SSLPKSDTKF TLVDEDGEEY TANYLPQKLG SSGGWRGFSK 60 AHKLVEGDAL VFHLVDVSIF KVYIVRSHTS ADVDTSPDLL KLECNTEGSD TGTMDKKKSK 120 KGAQKLVKFH PTIVLDEDEK LDAPSEGSHQ PEDRSSEEVI DSDVPEGIKL LGYMDEFQEM 180 KNLESFTVAV NDLAIDLEIP EHIQSKYYEL CRSQNTSLHK DLVMGSNSTL VVGIISEVVN 240 LAEGIRACKL STPREELEAW ENNLKAFKQL GMNVGFLLSR VGKLLELSSK SEQAFDLKRY 300 NEAMEGKNRV NGEITTLEMK ILEVRNDSMR LDRDIRTLKL QAEKFELAFK NEVSSPRFLW 360 IGHTKKAR

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MVPSQVSGGF WMGLPAKFCS SSLPKSDTKF TLVDEDGEEY TANYLPQKLG SSGGWRGFSK  60
AHKLVEGDAL VFHLVDVSIF KVYIVRSHTS ADVDTSPDLL KLECNTEGSD TGTMDKKKSK  120
KGAQKLVKFH PTIVLDEDEK LDAPSEGSHQ PEDRSSEEVI DSDVPEGIKL LGYMDEFQEM  180
KNLESFTVAV NDLAIDLEIP EHIQSKYYEL CRSQNTSLHK DLVMGSNSTL VVGIISEVVN  240
LAEGIRACKL STPREELEAW ENNLKAFKQL GMNVGFLLSR VGKLLELSSK SEQAFDLKRY  300
NEAMEGKNRV NGEITTLEMK ILEVRNDSMR LDRDIRTLKL QAEKFELAFK NEVSSPRFLW  360
IGHTKKAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	7e-34	B3 family protein