PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413065.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 405aa MW: 43947.7 Da PI: 7.8953

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.6e-17	52	97	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed +l ++v ++G ++W++Iar ++ gR++k+c++rw + XP_026413065.1 52 KGPWSPDEDAILSRLVSKFGARNWSLIARGIP-GRSGKSCRLRWCNQ 97 79****************************.*********985 PP
2	Myb_DNA-binding	55.6	1.2e-17	104	148	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eEd l+++a++ +G++ W++Iar ++ gRt++ +k++w++ XP_026413065.1 104 RKPFTEEEDMLIIKAHAVHGNR-WAAIARILQ-GRTDNAIKNHWNST 148 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MNQNEEIAAV NGGVTGGDKE NLVSNDGGSA GVVGVGSGLV NLGGGIRDDK VKGPWSPDED 60 AILSRLVSKF GARNWSLIAR GIPGRSGKSC RLRWCNQLDP ILKRKPFTEE EDMLIIKAHA 120 VHGNRWAAIA RILQGRTDNA IKNHWNSTLR RRCIELGQYR GTLTSGTMED ASQDKTKASS 180 EETLSCGDVN TSKSLEGKDI VVNSIENTPN EFPERTVVDQ MKPKETPTLF RPVGRVSAFS 240 AYNPLRSSTT DSMCSRVVPR PGPLIQGPKP DVGICQLLER VRGDPLVPCQ CGYSCCNGGA 300 RVESQNSLLG PEFVEFVEPP SFSAHDLALL ATDISNMAWI KSGVGQILDN ESASREIPIQ 360 AGTLVKTRRN DHPRFEEGRN KLTGMMSDAL STQMSMQQFA LPAKS

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MNQNEEIAAV NGGVTGGDKE NLVSNDGGSA GVVGVGSGLV NLGGGIRDDK VKGPWSPDED  60
AILSRLVSKF GARNWSLIAR GIPGRSGKSC RLRWCNQLDP ILKRKPFTEE EDMLIIKAHA  120
VHGNRWAAIA RILQGRTDNA IKNHWNSTLR RRCIELGQYR GTLTSGTMED ASQDKTKASS  180
EETLSCGDVN TSKSLEGKDI VVNSIENTPN EFPERTVVDQ MKPKETPTLF RPVGRVSAFS  240
AYNPLRSSTT DSMCSRVVPR PGPLIQGPKP DVGICQLLER VRGDPLVPCQ CGYSCCNGGA  300
RVESQNSLLG PEFVEFVEPP SFSAHDLALL ATDISNMAWI KSGVGQILDN ESASREIPIQ  360
AGTLVKTRRN DHPRFEEGRN KLTGMMSDAL STQMSMQQFA LPAKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	3e-98	MYB family protein