PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412919.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 402aa MW: 45930.9 Da PI: 8.6407

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.5	8.9e-17	39	128	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f kv+ +s v+ ++ +p++f+ ++ ++e+++ltl e+g ++ v++ +++++ l++GW +F+ an L +gD++vF+l++ ++f +v XP_026412919.1 39 FTKVMRQSQVSGGPWMKIPRNFCYSNL--PREKVDLTLLVEDGDEFIVRF----YPRMFALSGGWDHFATANMLIAGDVLVFQLVKATKF--KVY 125 89*******************7774..56789************....9999************************987777..888 PP EE- CS B3 96 vfr 98 ++r XP_026412919.1 126 IVR 128 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MKNKSSRTRS VNNIYRPKSL AQEQAEEIQS SLSQRYPSFT KVMRQSQVSG GPWMKIPRNF 60 CYSNLPREKV DLTLLVEDGD EFIVRFYPRM FALSGGWDHF ATANMLIAGD VLVFQLVKAT 120 KFKVYIVRGN GSMDVDVALD PPEFPVPAKE NDLEDDVYIK DLMPIQLYTR KRVKSHPSAP 180 ILGDAQMCVL SLEPPPMDHN NEVVDDSEVL KGMKLSDSIV EFQDVGSFRS FRIAVNGLII 240 DSEITEYVRT KYYELCCSQK AFLHKHLAPR LNSKLVAGII SETVNISDAI RASTLDTPKD 300 KFESWARGLD AFGKLGMNVG FLVSRLNKLI KLAFDSEQAF EYKRYRDIMS RKNHVVEEIT 360 SLEMKVLRLK NDSRRLEKDI KCLELDAQKH ILTFRKEAAS PW

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MKNKSSRTRS VNNIYRPKSL AQEQAEEIQS SLSQRYPSFT KVMRQSQVSG GPWMKIPRNF  60
CYSNLPREKV DLTLLVEDGD EFIVRFYPRM FALSGGWDHF ATANMLIAGD VLVFQLVKAT  120
KFKVYIVRGN GSMDVDVALD PPEFPVPAKE NDLEDDVYIK DLMPIQLYTR KRVKSHPSAP  180
ILGDAQMCVL SLEPPPMDHN NEVVDDSEVL KGMKLSDSIV EFQDVGSFRS FRIAVNGLII  240
DSEITEYVRT KYYELCCSQK AFLHKHLAPR LNSKLVAGII SETVNISDAI RASTLDTPKD  300
KFESWARGLD AFGKLGMNVG FLVSRLNKLI KLAFDSEQAF EYKRYRDIMS RKNHVVEEIT  360
SLEMKVLRLK NDSRRLEKDI KCLELDAQKH ILTFRKEAAS PW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	9e-27	B3 family protein